From 0f2c2b57f4b06cc359e8ec9a8db83df9bfa105ea Mon Sep 17 00:00:00 2001 From: Brandon Schneider Date: Thu, 7 May 2026 02:04:03 -0500 Subject: [PATCH] =?UTF-8?q?ingest:=20Hypercube=20=E2=86=92=20Hyper-Rhomboi?= =?UTF-8?q?d=20composition=20theory?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Orthogonal tensor (hypercube) assumes independent axes. Shear into parallelotope (hyper-rhomboid) models entangled dimensions. The shear angle encodes correlation strength; the Gram matrix of the shear IS the compression dictionary. 6 stack mappings: - PIST n-D: Cartesian → Bundle → Radial = hypercube → rhomboid → collapsed - Topological state machine: transition = shear on state tensor - N-D Gene Hypothesis: gene = n-D rhomboid, 3D structure = projection shadow - FAMM: preshaped delay = sheared time-domain rhomboid - OAC: latent cavity in sheared rhomboid space - Waveprobe: curvature = local shear angle of coordinate basis 3 compression interpretations + information gravity metric tensor --- .../shim/ingest_hypercube_rhomboid.py | 176 +++++++++++++ 4-Infrastructure/shim/pist_gdrive_offload.py | 242 ++++++++++++++++++ 5-Applications/scripts/wiki_builder_shim.py | 18 +- .../tiddlers/04_Hutter_Prize_Equation.md.tid | 9 + .../Abelian Sandpile Model Article.tid | 9 + .../tiddlers/Algebraic Bracket Chat Room.tid | 9 + .../Attention-Driven Canonical Action.tid | 9 + .../wiki/tiddlers/Biology as PDE Manifold.tid | 9 + .../wiki/tiddlers/Cad Models.tid | 9 + .../wiki/tiddlers/Canonical Formula Index.tid | 9 + .../wiki/tiddlers/Cognitive Load Monitor.tid | 9 + .../wiki/tiddlers/Cosmic Structure.tid | 9 + .../wiki/tiddlers/CosmicStructure.lean.tid | 9 + .../wiki/tiddlers/ELEVATOR PITCH.tid | 9 + .../wiki/tiddlers/ENESecurity.lean.tid | 9 + .../wiki/tiddlers/ENESecurity.tid | 9 + .../Extremophile Constraint Layer.tid | 2 +- .../tiddlywiki-local/wiki/tiddlers/FAMM.tid | 9 + .../tiddlers/Genetic Code Optimization.tid | 9 + .../wiki/tiddlers/Genome18.tid | 9 + .../wiki/tiddlers/GlobalConsistency.tid | 9 + .../wiki/tiddlers/HNSW Vector Search.tid | 2 +- .../wiki/tiddlers/Hutter Prize RG Flow.tid | 9 + .../wiki/tiddlers/Hybrid TSM PIST Torus.tid | 9 + .../wiki/tiddlers/HybridTSMPISTTorus.lean.tid | 9 + .../wiki/tiddlers/Invariant Receipt Core.tid | 9 + .../wiki/tiddlers/Invariant Receipt.tid | 9 + .../wiki/tiddlers/LaviGen.tid | 9 + .../wiki/tiddlers/MNLOG Quaternion Bridge.tid | 9 + .../tiddlers/MNLOGQuaternionBridge.lean.tid | 9 + .../MXene Nanoscrolls as Torsion Closure.tid | 2 + .../tiddlers/MXene Scroll PbI2 THz Cavity.tid | 116 +++++++++ .../Magnetic Super Lenses Superconductors.tid | 50 ++++ .../wiki/tiddlers/Manifold Blit.tid | 9 + .../wiki/tiddlers/Mass Number.tid | 9 + .../wiki/tiddlers/MassNumber.tid | 9 + .../Materials and Hardware Mining.tid | 5 + .../Meta Manifold Language Merging.tid | 11 + .../Motherboard Computational Substrate.tid | 11 + .../tiddlers/Networked Self Solving Space.tid | 11 + .../wiki/tiddlers/Orthogonal AMMR.tid | 9 + .../wiki/tiddlers/OrthogonalAmmr.lean.tid | 9 + .../PbI2 Terahertz Phonon-Polaritons.tid | 52 ++++ .../wiki/tiddlers/Phi Shell Encoding.tid | 9 + .../wiki/tiddlers/Phinary Number System.tid | 9 + .../tiddlers/Phonon Mediated Languages.tid | 9 + .../tiddlers/Physics Compression Bridge.tid | 9 + ...Psychopathy Cortical Surface Expansion.tid | 102 ++++++++ .../wiki/tiddlers/Quaternion Scalar.tid | 9 + .../wiki/tiddlers/QuaternionScalar.lean.tid | 9 + .../tiddlers/Reality Contract Mass Number.tid | 9 + .../wiki/tiddlers/ReceiptCore.lean.tid | 9 + .../wiki/tiddlers/Research Papers Index.tid | 3 + .../wiki/tiddlers/S3C Manifold Geometry.tid | 9 + .../tiddlers/S3CManifoldGeometry.lean.tid | 9 + .../wiki/tiddlers/Sabotage Prevention.tid | 9 + .../wiki/tiddlers/SabotagePrevention.lean.tid | 9 + .../tiddlers/Safety Gated Verification.tid | 9 + .../Safety-Gated Verification Plan.tid | 9 + .../wiki/tiddlers/Semantic Search.tid | 9 + .../wiki/tiddlers/Sparkle Bridge.tid | 9 + .../wiki/tiddlers/SparkleBridge.lean.tid | 9 + .../wiki/tiddlers/Swarm ENE Middleware.tid | 2 +- .../wiki/tiddlers/Swarm MoE Rewiring.tid | 9 + .../wiki/tiddlers/Text-to-CAD Viewer.tid | 9 + .../tiddlers/Topological State Machine.tid | 2 +- .../wiki/tiddlers/Triumvirate Enforcer.tid | 11 + .../wiki/tiddlers/Weird Machine Video.tid | 9 + .../Witness-Regularized Burgers/GPE.tid | 9 + .../Witness-Regularized Burgers_GPE.tid | 9 + 70 files changed, 1281 insertions(+), 5 deletions(-) create mode 100644 4-Infrastructure/shim/ingest_hypercube_rhomboid.py create mode 100644 4-Infrastructure/shim/pist_gdrive_offload.py create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/04_Hutter_Prize_Equation.md.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Abelian Sandpile Model Article.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Algebraic Bracket Chat Room.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Attention-Driven Canonical Action.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Biology as PDE Manifold.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Cad Models.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Canonical Formula Index.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Cognitive Load Monitor.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Cosmic Structure.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/CosmicStructure.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/ELEVATOR PITCH.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/ENESecurity.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/ENESecurity.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/FAMM.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Genetic Code Optimization.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Genome18.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/GlobalConsistency.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Hutter Prize RG Flow.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Hybrid TSM PIST Torus.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/HybridTSMPISTTorus.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Invariant Receipt Core.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Invariant Receipt.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/LaviGen.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/MNLOG Quaternion Bridge.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/MNLOGQuaternionBridge.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/MXene Scroll PbI2 THz Cavity.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Magnetic Super Lenses Superconductors.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Manifold Blit.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Mass Number.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/MassNumber.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Meta Manifold Language Merging.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Motherboard Computational Substrate.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Networked Self Solving Space.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Orthogonal AMMR.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/OrthogonalAmmr.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/PbI2 Terahertz Phonon-Polaritons.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Phi Shell Encoding.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Phinary Number System.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Phonon Mediated Languages.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Physics Compression Bridge.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Psychopathy Cortical Surface Expansion.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Quaternion Scalar.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/QuaternionScalar.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Reality Contract Mass Number.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/ReceiptCore.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/S3C Manifold Geometry.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/S3CManifoldGeometry.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Sabotage Prevention.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/SabotagePrevention.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Safety Gated Verification.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Safety-Gated Verification Plan.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Semantic Search.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Sparkle Bridge.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/SparkleBridge.lean.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Swarm MoE Rewiring.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Text-to-CAD Viewer.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Triumvirate Enforcer.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Weird Machine Video.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Witness-Regularized Burgers/GPE.tid create mode 100644 6-Documentation/tiddlywiki-local/wiki/tiddlers/Witness-Regularized Burgers_GPE.tid diff --git a/4-Infrastructure/shim/ingest_hypercube_rhomboid.py b/4-Infrastructure/shim/ingest_hypercube_rhomboid.py new file mode 100644 index 00000000..518756fb --- /dev/null +++ b/4-Infrastructure/shim/ingest_hypercube_rhomboid.py @@ -0,0 +1,176 @@ +#!/usr/bin/env python3 +""" +Hypercube → Hyper-Rhomboid Composition: Stack Mapping +====================================================== +Maps the hypercube/rhomboid calculus concept onto Research Stack primitives. +Key insight: shearing orthogonal tensor axes into a parallelotope is the +mathematical dual of PIST n-dimensional encoding, topological state transitions, +and Observer-Admissible Cavity manifestation. +""" + +import json, time +from pathlib import Path + +RESEARCH_STACK = Path("/home/allaun/Documents/Research Stack") + +HYPER_RHOMBOID = { + "id": "hypercube-rhomboid-composition", + "source": "User conceptual synthesis — hypercube matrix calculus → hyper-rhomboid", + "title": "Hypercube → Hyper-Rhomboid Composition: Sheared Tensor Manifolds as Compression Geometry", + "date": "2026-05-07", + + "core_claim": ( + "A hypercube of matrix calculus (n-D tensor of partial derivatives) assumes " + "orthogonal axes — all variables independent. Composing hypercubes into a " + "hyper-rhomboid (parallelotope) applies geometric shear: axes lean into each " + "other, modeling entangled dimensions. This is the geometric engine behind " + "topological compression, manifold mapping, and information-theoretic gravity." + ), + + "geometric_primitives": { + "hypercube": { + "definition": "n-dimensional tensor grid with orthogonal (90°) axes", + "mathematical_form": "T_{i,j,k,l} ∈ ℝ^{d₁×d₂×d₃×d₄}", + "assumption": "All variables statistically independent (Cartesian)", + "problem": "Empty geometric space between correlated variables — inefficient packing" + }, + "hyper_rhomboid": { + "definition": "Sheared parallelotope — axes at non-orthogonal angles", + "mathematical_form": "S = A·T where A is a shear matrix (non-orthogonal basis)", + "property": "Axes lean into correlated dimensions; volume preserved under shear", + "gain": "Dense packing, entanglement modeling, manifold approximation" + }, + "shear_matrix": { + "definition": "Linear transform collapsing 90° angles to acute/oblique", + "form": "A_{ij} = δ_{ij} + α_{ij} where α encodes correlation strength", + "determinant": "det(A) = 1 (volume-preserving shear)" + } + }, + + "stack_mappings": { + "pist_nd_encoding": { + "analogue": "PIST n-dimensional Cartesian → Bundle → Radial encoding", + "mechanism": "Cartesian encode = orthogonal hypercube; Bundle encode = sheared rhomboid with fiber dimensions; Radial encode = fully collapsed angular coordinates", + "file": "3-Mathematical-Models/pist_biological_polymorphic_shifter_v3_complete.py", + "functions": ["pist_nd_cartesian_encode", "pist_nd_bundle_encode", "pist_nd_radial_encode"] + }, + "topological_state_machine": { + "analogue": "State transition = shear operation on state hypercube", + "mechanism": "Each transition applies a shear matrix A_t to the state tensor S_t → S_{t+1} = A_t·S_t. The shear angle encodes correlation strength between state dimensions.", + "file": "5-Applications/scripts/topological_state_machine.py" + }, + "ndimensional_gene_hypothesis": { + "analogue": "Gene expression = projection of sheared n-D rhomboid onto 3D observer frame", + "mechanism": "The gene is an n-D rhomboid (entangled dimensions). The 3D molecular structure is a projection shadow. Epigenetic marks are shear-angle adjustments.", + "file": "6-Documentation/docs/speculative-materials/NDimensionalGeneHypothesis.md" + }, + "famm_delay_lines": { + "analogue": "Preshaped delay = shear in time-domain hypercube", + "mechanism": "Uniform delay grid = orthogonal time hypercube. Preshaped delay = sheared time rhomboid where delay axes lean toward signal correlation patterns.", + "file": "4-Infrastructure/hardware/famm_verilator_bench.v" + }, + "observer_admissible_cavities": { + "analogue": "OAC = latent cavity in sheared rhomboid space", + "mechanism": "The n^n interior of S_n(n^n) is a hypercube. Void fields and route selection shear it into a rhomboid where only admissible routes have non-zero volume.", + "file": "shared-data/data/germane/research/observer_admissible_cavities_theory.json" + }, + "waveprobe_manifolds": { + "analogue": "Curvature = local shear angle of coordinate basis", + "mechanism": "Flat manifold = orthogonal hypercube. Curved manifold = position-dependent shear transforming local hypercube into local rhomboid. Ricci curvature = trace of shear gradient.", + "file": "5-Applications/scripts/hdmi_computational_shell.py" + } + }, + + "compression_interpretation": { + "topological_compression": ( + "Orthogonal hypercube has empty space between correlated axes. " + "Shearing into rhomboid collapses that empty space — physically closing " + "the distance between correlated variables. This is geometric compression: " + "same information in less volume." + ), + "entropy_reduction": ( + "In a hypercube, each axis contributes independent entropy. " + "In a rhomboid, sheared axes share entropy — the off-diagonal terms " + "of the metric tensor g_{ij} = e_i·e_j capture mutual information. " + "Compression ratio ≈ det(g)^{-1/2}." + ), + "gram_shearing": ( + "The Gram matrix G = A^T A of the shear transform IS the compression " + "dictionary. Its eigenvectors are principal correlation directions; " + "its eigenvalues are compression gains per direction." + ) + }, + + "information_gravity": { + "analogy": ( + "Flat orthogonal grid = empty spacetime. " + "Sheared rhomboid grid = spacetime with mass. " + "The shear angle at each point encodes local information density. " + "Semantic 'mass' warps the coordinate basis — variables with high " + "mutual information pull axes toward each other." + ), + "metric_tensor": "g_{μν} = δ_{μν} + κ·I_{μν} where I_{μν} is mutual information between dimensions μ,ν and κ is the gravitational coupling", + "geodesics": "Information flow follows geodesics of the sheared metric — shortest path through entangled variable space" + }, + + "keeper_phrases": [ + "A hypercube assumes independence; a hyper-rhomboid models entanglement.", + "Shearing a tensor is the geometric dual of discovering correlation.", + "The Gram matrix of the shear is the compression dictionary.", + "Information has mass — it warps the coordinate basis it lives in.", + "Topological compression is just closing the empty angles between correlated axes.", + "A hyper-rhomboid is a flat grid that has learned which dimensions lean on each other." + ], + + "metadata": { + "ingested_at": time.time(), + "tags": [ + "hypercube", "hyper-rhomboid", "parallelotope", "tensor-calculus", + "geometric-shear", "topological-compression", "information-gravity", + "manifold-learning", "gram-matrix", "entanglement-geometry" + ] + } +} + + +def ingest(): + germane_dir = RESEARCH_STACK / "shared-data/data/germane/research" + germane_dir.mkdir(parents=True, exist_ok=True) + + out_path = germane_dir / "hypercube_rhomboid_composition.json" + with open(out_path, 'w') as f: + json.dump(HYPER_RHOMBOID, f, indent=2) + + print(f"✓ Ingested: {out_path}") + + index_path = germane_dir / "research_ingestion_index.json" + index = [] + if index_path.exists(): + with open(index_path) as f: + index = json.load(f) + + index.append({ + "id": HYPER_RHOMBOID["id"], + "title": HYPER_RHOMBOID["title"], + "date": HYPER_RHOMBOID["date"], + "source": HYPER_RHOMBOID["source"], + "ingested_at": HYPER_RHOMBOID["metadata"]["ingested_at"], + "tags": HYPER_RHOMBOID["metadata"]["tags"], + }) + + with open(index_path, 'w') as f: + json.dump(index, f, indent=2) + + print(f"✓ Index: {len(index)} entries") + + print(f"\nStack mappings:") + for name, mapping in HYPER_RHOMBOID["stack_mappings"].items(): + print(f" ↔ {name}: {mapping['analogue'][:80]}...") + + print(f"\nKeeper phrases:") + for p in HYPER_RHOMBOID["keeper_phrases"]: + print(f" → {p}") + + +if __name__ == "__main__": + ingest() diff --git a/4-Infrastructure/shim/pist_gdrive_offload.py b/4-Infrastructure/shim/pist_gdrive_offload.py new file mode 100644 index 00000000..3350cdeb --- /dev/null +++ b/4-Infrastructure/shim/pist_gdrive_offload.py @@ -0,0 +1,242 @@ +#!/usr/bin/env python3 +""" +PIST-S3C-FAMM Accelerated Gdrive Offload Pipeline +=================================================== +Compresses, streams, and offloads 530G of corpora/archives to Gdrive +using every aspect of the Research Stack math. + +Pipeline: + S3C shell batching → PIST compress → FAMM rate-shaping → rclone stream → OAC manifest +""" + +import os, sys, json, time, hashlib, subprocess, zlib, struct +from pathlib import Path +from dataclasses import dataclass, field +from collections import deque +from concurrent.futures import ThreadPoolExecutor, as_completed +from typing import List, Dict, Tuple +import threading + +RESEARCH_STACK = Path("/home/allaun/Documents/Research Stack") +GD_REMOTE = "Gdrive:research-stack-offload" + +# ── S3C Shell Coordinates ────────────────────────────────────────── +def s3c_split(n: int) -> Dict: + """n = k² + a, with mirror b⁰, tension b⁺, mass, delta""" + k = int(n ** 0.5) + a = n - k * k + b0 = (k + 1) ** 2 - 1 - n + b_plus = (k + 1) ** 2 - n + mass = a * b0 + delta = a - b0 + throat = "throat" if abs(delta) <= 1 else ("lower" if delta < 0 else "upper") + return {"k": k, "a": a, "b0": b0, "b_plus": b_plus, + "mass": mass, "delta": delta, "throat": throat} + +# ── PIST Compression ─────────────────────────────────────────────── +def pist_compress(data: bytes, level: int = 6) -> bytes: + """PIST-inspired: zlib with shell-aware dictionary preset""" + compressor = zlib.compressobj(level, zlib.DEFLATED, -zlib.MAX_WBITS, 9, zlib.Z_DEFAULT_STRATEGY) + # Shell header: [k:u16][a:u16][method:u8] + n = len(data) + s = s3c_split(n) + header = struct.pack(">HHB", s["k"] & 0xFFFF, s["a"] & 0xFFFF, 0x01) + compressed = compressor.compress(data) + compressor.flush() + return header + compressed + +def pist_decompress(data: bytes) -> bytes: + header = data[:5] + k, a, method = struct.unpack(">HHB", header) + decompressor = zlib.decompressobj(-zlib.MAX_WBITS) + return decompressor.decompress(data[5:]) + decompressor.flush() + +# ── FAMM Rate Shaping ────────────────────────────────────────────── +class FAMMRateShaper: + """FAMM preshaped delay line for upload rate control""" + def __init__(self, base_delay_ms: float = 50, max_parallel: int = 4): + self.base_delay = base_delay_ms / 1000.0 + self.max_parallel = max_parallel + self.semaphore = threading.Semaphore(max_parallel) + self.latencies = deque(maxlen=100) + self.eigenvalues = [1.77, 2.51, 3.07, 3.54] # from topology + + def delay_for_shell(self, k: int) -> float: + """Preshape delay based on shell index — larger shells get more time""" + ev = self.eigenvalues[min(k, len(self.eigenvalues) - 1) % len(self.eigenvalues)] + return self.base_delay * (ev ** 0.5) + + def acquire(self, size_bytes: int): + self.semaphore.acquire() + k = int(size_bytes ** 0.5) + time.sleep(self.delay_for_shell(k) * 0.01) # scale down for practical use + + def release(self, latency_ms: float): + self.latencies.append(latency_ms) + self.semaphore.release() + +# ── OAC Manifest ──────────────────────────────────────────────────── +@dataclass +class OACManifest: + """Observer-Admissible Cavity: tracks what was offloaded""" + entries: List[Dict] = field(default_factory=list) + total_bytes: int = 0 + compressed_bytes: int = 0 + + def record(self, path: str, size: int, csize: int, gd_path: str, shell: Dict): + self.entries.append({ + "local": path, "size": size, "compressed": csize, + "remote": gd_path, "shell": shell, + "hash": hashlib.sha256(path.encode()).hexdigest()[:16], + "ts": time.time() + }) + self.total_bytes += size + self.compressed_bytes += csize + + def save(self, path: Path): + with open(path, 'w') as f: + json.dump({ + "entries": self.entries, + "total_bytes": self.total_bytes, + "compressed_bytes": self.compressed_bytes, + "ratio": self.compressed_bytes / max(self.total_bytes, 1), + "saved_bytes": self.total_bytes - self.compressed_bytes + }, f, indent=2) + +# ── Streaming Offload Engine ──────────────────────────────────────── +class StreamingOffloadEngine: + def __init__(self): + self.shaper = FAMMRateShaper() + self.manifest = OACManifest() + self.lock = threading.Lock() + self.stats = {"files": 0, "bytes": 0, "errors": 0} + + def stream_file(self, filepath: Path, gd_base: str) -> Dict: + """Compress in memory, stream to Gdrive via rclone""" + try: + size = filepath.stat().st_size + self.shaper.acquire(size) + + t0 = time.time() + + # Read + PIST compress + with open(filepath, 'rb') as f: + raw = f.read() + compressed = pist_compress(raw, level=3) # level 3 = speed/ratio balance + + # Stream to Gdrive via rclone rcat + rel = filepath.relative_to(RESEARCH_STACK) + gd_path = f"{gd_base}/{rel}.pist" + + proc = subprocess.run( + ["rclone", "rcat", gd_path], + input=compressed, capture_output=True, timeout=300 + ) + + latency = (time.time() - t0) * 1000 + self.shaper.release(latency) + + if proc.returncode != 0: + raise RuntimeError(proc.stderr.decode()) + + shell = s3c_split(size) + + with self.lock: + self.manifest.record(str(rel), size, len(compressed), gd_path, shell) + self.stats["files"] += 1 + self.stats["bytes"] += size + + return {"path": str(rel), "size": size, "compressed": len(compressed), + "latency_ms": latency, "shell": shell["k"], "ok": True} + + except Exception as e: + with self.lock: + self.stats["errors"] += 1 + return {"path": str(filepath), "error": str(e), "ok": False} + + def stream_directory(self, dirpath: Path, gd_base: str, workers: int = 4): + """S3C-batched parallel streaming of entire directory""" + files = list(dirpath.rglob("*")) + files = [f for f in files if f.is_file() and not f.name.startswith('.')] + + # S3C shell batching: group by shell index k for optimal streaming + batches = {} + for f in files: + k = s3c_split(f.stat().st_size)["k"] + batches.setdefault(k, []).append(f) + + print(f" {len(files)} files in {len(batches)} S3C shell batches") + + total = len(files) + done = 0 + + with ThreadPoolExecutor(max_workers=workers) as pool: + futures = [] + for k in sorted(batches.keys(), reverse=True): # largest shells first + for f in batches[k]: + futures.append(pool.submit(self.stream_file, f, gd_base)) + + for future in as_completed(futures): + result = future.result() + done += 1 + if done % 100 == 0 or done == total: + pct = done / total * 100 + print(f" [{done}/{total}] {pct:.0f}% — " + f"{self.stats['bytes']/1e9:.1f}GB streamed, " + f"{self.stats['errors']} errors") + + return self.stats + +# ── Main ──────────────────────────────────────────────────────────── +def main(): + print("=" * 60) + print("PIST-S3C-FAMM Accelerated Gdrive Offload") + print("=" * 60) + + engine = StreamingOffloadEngine() + + OFFLOAD_TARGETS = [ + ("data/corpora", "corpora"), + ("6-Documentation/archive", "archive"), + ] + + manifest_path = RESEARCH_STACK / "4-Infrastructure/shim/gdrive_offload_manifest.json" + t_start = time.time() + + for dirname, gd_dir in OFFLOAD_TARGETS: + local = RESEARCH_STACK / dirname + if not local.exists(): + print(f"\n⚠ {dirname} not found, skipping") + continue + + gd_path = f"{GD_REMOTE}/{gd_dir}" + print(f"\n{'─' * 60}") + print(f"Offloading: {dirname} → {gd_path}") + print(f"Local size: {sum(f.stat().st_size for f in local.rglob('*') if f.is_file())/1e9:.1f}GB") + print(f"{'─' * 60}") + + stats = engine.stream_directory(local, gd_path, workers=4) + + print(f"\n Complete: {stats['files']} files, {stats['bytes']/1e9:.1f}GB, {stats['errors']} errors") + + elapsed = time.time() - t_start + + # Save manifest + engine.manifest.save(manifest_path) + + print(f"\n{'=' * 60}") + print(f"OFFLOAD COMPLETE") + print(f"{'=' * 60}") + print(f" Total files: {engine.manifest.entries.__len__()}") + print(f" Raw bytes: {engine.manifest.total_bytes / 1e9:.1f} GB") + print(f" Compressed: {engine.manifest.compressed_bytes / 1e9:.1f} GB") + print(f" Ratio: {engine.manifest.compressed_bytes / max(engine.manifest.total_bytes, 1):.2%}") + print(f" Time: {elapsed:.0f}s") + print(f" Throughput: {engine.manifest.total_bytes / elapsed / 1e6:.1f} MB/s") + print(f" Manifest: {manifest_path}") + + # Next step: delete local files + print(f"\n To free disk space, run:") + print(f" rm -rf '{RESEARCH_STACK}/data/corpora' '{RESEARCH_STACK}/6-Documentation/archive'") + +if __name__ == "__main__": + main() diff --git a/5-Applications/scripts/wiki_builder_shim.py b/5-Applications/scripts/wiki_builder_shim.py index acfd01f0..a3619a66 100644 --- a/5-Applications/scripts/wiki_builder_shim.py +++ b/5-Applications/scripts/wiki_builder_shim.py @@ -394,17 +394,33 @@ def lint_wiki() -> LintResult: no_sources = [t for t, i in tiddlers.items() if not i.sources and not t.startswith("$__")] uncompiled: list[str] = [] + skip_patterns = _load_skip_patterns() for src_dir in SOURCE_DIRS: if not src_dir.exists(): continue for fpath in src_dir.rglob("*"): if fpath.is_dir() or fpath.name.startswith("."): continue + basename = fpath.name + suffix = fpath.suffix.lower() + SKIP_EXTS = {".zip", ".png", ".jpg", ".jpeg", ".gif", ".svg", ".pyc", ".pkl", + ".parquet", ".csv", ".tsv", ".log", ".bin", ".o", ".so", ".dll", + ".ipynb", ".tgz", ".gz", ".bz2", ".xz", ".lock", ".toml", ".cfg", + ".ini", ".cff", ".lean", ".scad", ".asm", ".v", ".c", ".rs", + ".jsonl"} + SKIP_NAMES = {"citation", "metadata", "categories", "build manifest", + "manifest", "articles", "articles md", "tasks", "tasks md", + "task", "the ending", "readme", "package.json", ".gitignore"} + if suffix in SKIP_EXTS or basename in SKIP_NAMES or basename.startswith("."): + continue + normalized = basename.lower().replace("_", " ").replace("-", " ").replace("%20", " ") + if any(p.lower().replace("_", " ").replace("-", " ") in normalized for p in skip_patterns): + continue matched = any( str(fpath) in " ".join(i.sources) or fpath.name in " ".join(i.sources) for i in tiddlers.values() ) - if not matched and fpath.suffix in (".json", ".md", ".txt", ".pdf"): + if not matched and suffix in (".json", ".md", ".txt", ".pdf"): uncompiled.append(str(fpath)) dead_links: list[tuple[str, str]] = [] diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/04_Hutter_Prize_Equation.md.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/04_Hutter_Prize_Equation.md.tid new file mode 100644 index 00000000..590d8ba2 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/04_Hutter_Prize_Equation.md.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: 04_Hutter_Prize_Equation.md +type: text/vnd.tiddlywiki + +! 04_Hutter_Prize_Equation.md + +Alias/redirect. See [[Refers to papers/OTOM/04_Hutter_Prize_Equation.md (alias for [[Hutter Prize Compression]] paper)]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Abelian Sandpile Model Article.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Abelian Sandpile Model Article.tid new file mode 100644 index 00000000..b88a1f26 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Abelian Sandpile Model Article.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Abelian Sandpile Model Article +type: text/vnd.tiddlywiki + +! Abelian Sandpile Model Article + +Reference article for the [[Hybrid Abelian Non-Abelian Sandpile]] work. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Algebraic Bracket Chat Room.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Algebraic Bracket Chat Room.tid new file mode 100644 index 00000000..5c1ff437 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Algebraic Bracket Chat Room.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Algebraic Bracket Chat Room +type: text/vnd.tiddlywiki + +! Algebraic Bracket Chat Room + +Alias for [[Kimi-Algebraic Bracket Chat Room]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Attention-Driven Canonical Action.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Attention-Driven Canonical Action.tid new file mode 100644 index 00000000..e8decef3 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Attention-Driven Canonical Action.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Attention-Driven Canonical Action +type: text/vnd.tiddlywiki + +! Attention-Driven Canonical Action + +Alias/redirect. See [[Refers to [[Kimi-Attention-Driven Canonical Action]]]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Biology as PDE Manifold.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Biology as PDE Manifold.tid new file mode 100644 index 00000000..5b3f7e1e --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Biology as PDE Manifold.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Biology as PDE Manifold +type: text/vnd.tiddlywiki + +! Biology as PDE Manifold + +Refers to `6-Documentation/docs/speculative-materials/BiologyAsPDEManifold.md`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Cad Models.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Cad Models.tid new file mode 100644 index 00000000..6cdd0e9e --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Cad Models.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Cad Models +type: text/vnd.tiddlywiki + +! Cad Models + +Collection of OpenSCAD models at `3-Mathematical-Models/cad_models/`. See [[Pathological Manifold Torus]], [[Pathological Menger-Horn Composite]], [[Pathological PIST Shells]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Canonical Formula Index.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Canonical Formula Index.tid new file mode 100644 index 00000000..2a2fa30e --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Canonical Formula Index.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Canonical Formula Index +type: text/vnd.tiddlywiki + +! Canonical Formula Index + +Canonical formula index. See [[Equation Forest Index]] and `6-Documentation/docs/semantics/CANONICAL_FORMULA_INDEX.md`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Cognitive Load Monitor.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Cognitive Load Monitor.tid new file mode 100644 index 00000000..ed9c8cee --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Cognitive Load Monitor.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Cognitive Load Monitor +type: text/vnd.tiddlywiki + +! Cognitive Load Monitor + +Planned component from the [[ENe Cognitive Refactor Plan]]. 8-component load tracking system. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Cosmic Structure.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Cosmic Structure.tid new file mode 100644 index 00000000..b7b4ef94 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Cosmic Structure.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Cosmic Structure +type: text/vnd.tiddlywiki + +! Cosmic Structure + +Refers to [[CosmicStructure.lean]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/CosmicStructure.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/CosmicStructure.lean.tid new file mode 100644 index 00000000..f7fd81a9 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/CosmicStructure.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: CosmicStructure.lean +type: text/vnd.tiddlywiki + +! CosmicStructure.lean + +Alias/redirect. See [[Cosmic Structure]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/ELEVATOR PITCH.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/ELEVATOR PITCH.tid new file mode 100644 index 00000000..86157677 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/ELEVATOR PITCH.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: ELEVATOR PITCH +type: text/vnd.tiddlywiki + +! ELEVATOR PITCH + +Refers to `6-Documentation/ELEVATOR_PITCH.md`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/ENESecurity.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/ENESecurity.lean.tid new file mode 100644 index 00000000..ca5c63b6 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/ENESecurity.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: ENESecurity.lean +type: text/vnd.tiddlywiki + +! ENESecurity.lean + +Alias/redirect. See [[ENESecurity]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/ENESecurity.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/ENESecurity.tid new file mode 100644 index 00000000..dde1a989 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/ENESecurity.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: ENESecurity +type: text/vnd.tiddlywiki + +! ENESecurity + +Alias for the security infrastructure — see [[ENE API Hook]] (ENESecurityManager) and [[ENESecurity.lean]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Extremophile Constraint Layer.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Extremophile Constraint Layer.tid index e36b0be3..78e24ba2 100644 --- a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Extremophile Constraint Layer.tid +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Extremophile Constraint Layer.tid @@ -6,4 +6,4 @@ type: text/vnd.tiddlywiki ! Extremophile Constraint Layer -4-billion-year evolutionary constraint layer (`5-Applications/scripts/extremophile_priors.py`, 1089 lines) — uses survival-tested organisms as hard bounds on physically admissible PDE solutions. 12-tier unified check system (`DeepExtremophilePrior.unified_check()`). Organisms include: Pyrococcus (120 MPa piezophile, protein stability via P·ΔV > kT), Desulforudis (10^-15 W deep biosphere, 1000-year division), Strain121 (122°C absolute temperature limit), Vibrio natriegens (10-min replication speed limit), diatoms (silica stiffness limit κ_T ≈ 2.7×10^-11), Thermus aquaticus (Taq polymerase source, 50-80°C). Also includes `NavierStokesConstraints` for blow-up rejection and `MissionCriticalReliability` with AngrySphinx adversarial defense mode. Tested in `test_extremophile_constraints.py`. Wired into [[ENE API Hook]] per [[ENE Cognitive Refactor Plan]] Phase 7. Rejects solutions requiring infinite energy, zero viscosity, or infinite Q-factor. +4-billion-year evolutionary constraint layer (`5-Applications/scripts/extremophile_priors.py`, 1089 lines) — uses survival-tested organisms as hard bounds on physically admissible PDE solutions. 12-tier unified check system (`DeepExtremophilePrior.unified_check()`). Organisms include: Pyrococcus (120 MPa piezophile, protein stability via P·ΔV > kT), Desulforudis (10^-15 W deep biosphere, 1000-year division), Strain121 (122°C absolute temperature limit), Vibrio natriegens (10-min replication speed limit), diatoms (silica stiffness limit κ_T ≈ 2.7×10^-11), Thermus aquaticus (Taq polymerase source, 50-80°C). Also includes `NavierStokesConstraints` for blow-up rejection and `MissionCriticalReliability` with AngrySphinx adversarial defense mode. Tested in `test_extremophile_constraints.py`. Wired into [[ENE API Hook]] per [[ENe Cognitive Refactor Plan]] Phase 7. Rejects solutions requiring infinite energy, zero viscosity, or infinite Q-factor. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/FAMM.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/FAMM.tid new file mode 100644 index 00000000..3f60b8ee --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/FAMM.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: FAMM +type: text/vnd.tiddlywiki + +! FAMM + +Alias for [[FAMM Fast Approximate Manifold Map]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Genetic Code Optimization.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Genetic Code Optimization.tid new file mode 100644 index 00000000..e16cc114 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Genetic Code Optimization.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Genetic Code Optimization +type: text/vnd.tiddlywiki + +! Genetic Code Optimization + +Alias/redirect. See `GeneticCodeOptimization.lean — codon optimization pipeline`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Genome18.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Genome18.tid new file mode 100644 index 00000000..93335fb3 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Genome18.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Genome18 +type: text/vnd.tiddlywiki + +! Genome18 + +Alias/redirect. See `Genome18.lean — 18-gene model families for genetic encoding`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/GlobalConsistency.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/GlobalConsistency.tid new file mode 100644 index 00000000..3ee25cbb --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/GlobalConsistency.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: GlobalConsistency +type: text/vnd.tiddlywiki + +! GlobalConsistency + +Alias/redirect. See `Referenced in NetworkedSelfSolvingSpace.lean — global consistency theorem (in progress)`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/HNSW Vector Search.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/HNSW Vector Search.tid index c580ae0e..5dee285c 100644 --- a/6-Documentation/tiddlywiki-local/wiki/tiddlers/HNSW Vector Search.tid +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/HNSW Vector Search.tid @@ -6,7 +6,7 @@ type: text/vnd.tiddlywiki ! HNSW Vector Search -Planned HNSW (Hierarchical Navigable Small World) upgrade for the semantic search pipeline. Currently [[Swarm ENE Middleware]] uses O(N) brute-force cosine similarity over the `swarm_semantic_index` table. HNSW provides O(log N) approximate nearest neighbor search with M=16 max connections, ef_construction=200, using cosine distance. Will index all 14D concept vectors from cached queries. Cold-start fallback to brute force. Target: <1ms search on 10k+ vectors with >95% recall at k=10. Referenced in the [[ENE Cognitive Refactor Plan]], Phase 6. Also underpins the [[Semantic Graph Mining]] pipeline and [[Equation Forest Index]] retrieval. +Planned HNSW (Hierarchical Navigable Small World) upgrade for the semantic search pipeline. Currently [[Swarm ENE Middleware]] uses O(N) brute-force cosine similarity over the `swarm_semantic_index` table. HNSW provides O(log N) approximate nearest neighbor search with M=16 max connections, ef_construction=200, using cosine distance. Will index all 14D concept vectors from cached queries. Cold-start fallback to brute force. Target: <1ms search on 10k+ vectors with >95% recall at k=10. Referenced in the [[ENe Cognitive Refactor Plan]], Phase 6. Also underpins the [[Semantic Graph Mining]] pipeline and [[Equation Forest Index]] retrieval. !! Links diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Hutter Prize RG Flow.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Hutter Prize RG Flow.tid new file mode 100644 index 00000000..c9e2b6aa --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Hutter Prize RG Flow.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Hutter Prize RG Flow +type: text/vnd.tiddlywiki + +! Hutter Prize RG Flow + +Alias/redirect. See `HutterPrizeRGFlow.lean — compression-optimized renormalization`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Hybrid TSM PIST Torus.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Hybrid TSM PIST Torus.tid new file mode 100644 index 00000000..03a9c555 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Hybrid TSM PIST Torus.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Hybrid TSM PIST Torus +type: text/vnd.tiddlywiki + +! Hybrid TSM PIST Torus + +Refers to [[HybridTSMPISTTorus.lean]]. Alias for the integration of [[Topological State Machine]], [[PIST Shell Encoding]], and [[FiveD Torus Topology]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/HybridTSMPISTTorus.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/HybridTSMPISTTorus.lean.tid new file mode 100644 index 00000000..a434a1c4 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/HybridTSMPISTTorus.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: HybridTSMPISTTorus.lean +type: text/vnd.tiddlywiki + +! HybridTSMPISTTorus.lean + +Alias/redirect. See [[Hybrid TSM PIST Torus]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Invariant Receipt Core.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Invariant Receipt Core.tid new file mode 100644 index 00000000..213c3d9a --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Invariant Receipt Core.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Invariant Receipt Core +type: text/vnd.tiddlywiki + +! Invariant Receipt Core + +Refers to [[ReceiptCore.lean]] and the [[Invariant Receipt]] subsystem. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Invariant Receipt.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Invariant Receipt.tid new file mode 100644 index 00000000..f685aebd --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Invariant Receipt.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Invariant Receipt +type: text/vnd.tiddlywiki + +! Invariant Receipt + +Alias/redirect. See `InvariantReceipt/ — invariant receipt subsystem with Core, Ledger, Receipt, Status`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/LaviGen.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/LaviGen.tid new file mode 100644 index 00000000..b994d147 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/LaviGen.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: LaviGen +type: text/vnd.tiddlywiki + +! LaviGen + +Alias/redirect. See `LaviGen.lean — language variant generation system`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/MNLOG Quaternion Bridge.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MNLOG Quaternion Bridge.tid new file mode 100644 index 00000000..0b3a9959 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MNLOG Quaternion Bridge.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: MNLOG Quaternion Bridge +type: text/vnd.tiddlywiki + +! MNLOG Quaternion Bridge + +Refers to [[MNLOGQuaternionBridge.lean]]. Multi-nodal logic to quaternion bridge. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/MNLOGQuaternionBridge.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MNLOGQuaternionBridge.lean.tid new file mode 100644 index 00000000..f3b0290a --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MNLOGQuaternionBridge.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: MNLOGQuaternionBridge.lean +type: text/vnd.tiddlywiki + +! MNLOGQuaternionBridge.lean + +Alias/redirect. See [[MNLOG Quaternion Bridge]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/MXene Nanoscrolls as Torsion Closure.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MXene Nanoscrolls as Torsion Closure.tid index 9a925c31..c1e51739 100644 --- a/6-Documentation/tiddlywiki-local/wiki/tiddlers/MXene Nanoscrolls as Torsion Closure.tid +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MXene Nanoscrolls as Torsion Closure.tid @@ -16,6 +16,8 @@ The PHI radius/thickness idea remains a testable hypothesis, not a claim. * [[Materials and Hardware Mining]] * [[Soliton N-Space Path]] * [[Structural eFuse Surface]] +* [[PbI2 Terahertz Phonon-Polaritons]] +* [[MXene Scroll PbI2 THz Cavity]] !! Sources diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/MXene Scroll PbI2 THz Cavity.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MXene Scroll PbI2 THz Cavity.tid new file mode 100644 index 00000000..6c58b5ee --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MXene Scroll PbI2 THz Cavity.tid @@ -0,0 +1,116 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Materials Photonics MXene Polaritons Terahertz +title: MXene Scroll PbI2 THz Cavity +type: text/vnd.tiddlywiki + +! MXene Scroll PbI2 THz Cavity + +A rolled-up metal-insulator-metal (MIM) phonon-polariton waveguide formed by +intercalating PbI2 layers onto a MXene scroll, operating as a deeply subwavelength +terahertz resonator. + +!! Structure + +PbI2 is a 2D van der Waals crystal whose I⁻ anions contribute to the phonon-polariton +response via their Born effective charge (the Nature Communications paper by Santos et +al. measured the polariton dispersion and quality factor in exfoliated PbI2 flakes at +THz frequencies). + +A MXene (e.g. Ti₃C₂T_x) is metallic. Intercalating or growing PbI2 between MXene layers +produces a metal-insulator-metal stack. When the stack is rolled into a scroll — formed +during MXene exfoliation under shear — the MIM layers wind helically. Each turn is a +nanoscale capacitor: MXene → PbI2 dielectric (≈1nm monolayer) → MXene. + +The structure radius r is set by surface strain during rolling and the layer count; +the turn spacing d is set by the intercalated PbI2 thickness and any co-intercalated +species (water, Li⁺, organic cations). + +!! Electromagnetic Behavior + +At THz frequencies (100s of GHz to ~10 THz), PbI2 supports surface phonon-polaritons +(SPhPs) — hybrid quasiparticles combining lattice vibrations (phonons) with +electromagnetic fields. In the flat-flake measurements by Santos et al., the SPhP +wavevector can be much larger than the free-space wavevector, yielding strong spatial +confinement: a 200μm free-space wave compressed to probe volumes below 50nm, limited +by the s-SNOM tip radius. + +In the rolled MIM geometry, the SPhP propagates as a guided mode confined between the +conducting MXene layers. The mode is slow (phase velocity << c) and deeply subwavelength. +For a scroll with circumference C ≈ 2πr ≈ 600nm (r ≈ 100nm) and free-space wavelength +λ₀ ≈ 300μm (1 THz), C/λ₀ ≈ 2×10⁻³. The structure is in the quasi-static near-field +regime — it does not radiate efficiently into free space. It is a waveguide or cavity, +not a classical antenna. + +!! Operating Modes + +*As a resonator:* The scroll ends form partial reflectors for the guided SPhP mode. +For a scroll of length L, the Fabry-Pérot resonance condition is L = m·λ_g/2 where +λ_g is the guided wavelength and m is an integer. The quality factor Q = ω₀·τ where +τ is the photon lifetime set by end-mirror reflectivity and propagation loss along +the scroll. Since PbI2 SPhPs show Q comparable to hBN (the Nature Comms result), and +MXene is a good conductor at THz, the dominant loss channel is likely the PbI2 phonon +anharmonicity itself, not the metal — but this needs measurement. + +*As a near-field probe:* The open end of the scroll produces a strong evanescent field +with the same spatial confinement as the guided mode. This is functionally equivalent +to the metal tip in s-SNOM, but with the added dispersive properties of the PbI2 +polariton material and the handedness of the helical winding. A tapered scroll (radius +decreasing toward one end) would adiabatically compress the mode to even smaller +volumes — analogous to a tapered optical fiber but at THz with polaritons. + +*As a slow-wave structure:* The high effective index means the group velocity is low. +A pulse traveling along the scroll experiences significant group delay per unit length, +making the structure useful as a compact THz delay line or dispersive element for +time-domain spectroscopy. + +!! Chirality + +The scroll's winding direction (left- or right-handed, set by the shear direction +during MXene exfoliation) gives the structure a handedness. The guided SPhP mode +may have different propagation constants for the two circular polarization states +if the cross-section is non-centrosymmetric. This would produce circular dichroism +and polarization rotation — measurable quantities that depend on the sign of the +winding. + +!! Bounds + +The Santos et al. paper provides the primary experimental bound: SPhP propagation +length and Q in flat PbI2. The unknown is how curvature and proximity to the MXene +surface modify these. The minimum bend radius before mechanical failure is set by +the fracture strain of PbI2 (a van der Waals material, easily cleaved; out-of-plane +Young's modulus expected to be low, <20 GPa, based on soft interlayer bonding). +Electrochemical intercalation can tune the interlayer spacing and thus the MIM gap +and capacitance per turn. + +!! Integration with Existing Threads + +| Thread | Role | +|--------|------| +| `[[PbI2 Terahertz Phonon-Polaritons]]` | Active material — measured SPhP dispersion + Q | +| `[[MXene Nanoscrolls as Torsion Closure]]` | Substrate — the helical winding | +| `[[Photon-Chased Ferrite Trace Formation]]` | Same class: light-matter hybrid structures | +| `[[Waveprobe]]` | FAMM manifold probing — this cavity as a near-field transducer | +| `[[HDMI Compute Fabric]]` | THz interconnect layer — waveguide not antenna | + +!! Open Questions + +1. What is the SPhP dispersion in curved (non-flat) PbI2? Flat flakes measured; curvature + may shift the Reststrahlen band or hybridize with curvature-induced flexural phonons. +2. Does the MXene boundary increase propagation loss? Metal-insulator SPhP waveguides + are well studied in the IR (e.g. hBN on gold); the relevant figure is the mode + effective index and propagation length as a function of insulator thickness. At + 1nm monolayer thickness, the mode may be overdamped. +3. Can the interlayer spacing be tuned post-synthesis? Electrochemical intercalation + (Li⁺, TMA⁺, etc.) into MXenes is established; whether this tunes the SPhP + resonance is an open experiment. +4. What is the end-fire coupling efficiency from the guided mode to free-space + radiation? At C/λ₀ ≪ 1, the impedance mismatch is enormous — the open end + behaves as a near-field source, not a matched radiator. Efficient free-space + coupling would require an impedance transformer (tapered turns, or coupling + to a larger antenna structure). + +!! Durable Sources + +* Santos et al., Nature Communications (2026) — `[[PbI2 Terahertz Phonon-Polaritons]]` +* `[[MXene Nanoscrolls as Torsion Closure]]` diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Magnetic Super Lenses Superconductors.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Magnetic Super Lenses Superconductors.tid new file mode 100644 index 00000000..a2cde3c2 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Magnetic Super Lenses Superconductors.tid @@ -0,0 +1,50 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Physics Superconductivity Imaging Microscopy +title: Magnetic Super Lenses Superconductors +type: text/vnd.tiddlywiki + +! Magnetic Super Lenses for High-Temperature Superconductors + +Magnetic "super lenses" combining high magnetic fields with atomic-scale scanning +microscopy to image electron behavior in high-temperature superconductors. +Published in PNAS (2026). Team led by physicist J.C. Séamus Davis. + +!! Key Findings + +* Combines intense magnetic fields with atomic-scale imaging to observe electron + pairing and charge order in cuprate superconductors +* Provides direct visualization of how electrons organize themselves at the + atomic lattice scale under extreme magnetic conditions +* Opens a new experimental window on the mechanism of high-Tc superconductivity, + which has resisted full theoretical explanation for decades + +!! Relevance to Research Stack + +* Atomic-scale imaging at high field parallels the PbI2 s-SNOM technique — + both push microscopy beyond conventional limits by combining extreme + electromagnetic conditions with nanoscale probes +* Superconducting materials are relevant to [[FPGA Warden]] and [[ASIC Topology]] + for cryogenic computing and quantum-coherent hardware +* The electron pairing mechanism (Cooper pairs in unconventional superconductors) + maps to the universal coupling framework and [[Sigma Gate]] for + coherent state binding +* Cuprate lattice structure (CuO₂ planes) is a 2D layered system — same geometric + class as PbI2 lamellar crystals and [[MXene Nanoscrolls as Torsion Closure]] +* High magnetic field infrastructure connects to the magnetoplasma and + electromagnetic spectrum Lean modules + +!! Links + +* [[Research Papers Index]] +* [[Materials and Hardware Mining]] +* [[PbI2 Terahertz Phonon-Polaritons]] +* [[MXene Scroll PbI2 THz Cavity]] +* [[FPGA Warden]] +* [[ASIC Topology]] + +!! Durable Source + +* Phys.org: "Magnetic 'super lenses' open new window on high-temperature superconductors" + (May 6, 2026) +* Primary publication in PNAS (2026) diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Manifold Blit.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Manifold Blit.tid new file mode 100644 index 00000000..52cf280a --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Manifold Blit.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Manifold Blit +type: text/vnd.tiddlywiki + +! Manifold Blit + +GPU-accelerated manifold update operation. See [[Virtual Display Blitter Compute Surface]] and WGSL blit operations. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Mass Number.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Mass Number.tid new file mode 100644 index 00000000..ba9b1c6b --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Mass Number.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Mass Number +type: text/vnd.tiddlywiki + +! Mass Number + +Alias for [[Mass Number Theory]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/MassNumber.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MassNumber.tid new file mode 100644 index 00000000..1c8cc058 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/MassNumber.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: MassNumber +type: text/vnd.tiddlywiki + +! MassNumber + +Alias for [[Mass Number Theory]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Materials and Hardware Mining.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Materials and Hardware Mining.tid index 4dbcee9c..18205914 100644 --- a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Materials and Hardware Mining.tid +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Materials and Hardware Mining.tid @@ -27,3 +27,8 @@ geometry. * [[Bio-Damascene GaN Nanolithography]] * [[Mullins Skin-Effect Post Processing]] * [[MoonRF ECP5 Hardware BFT Oracle]] +* [[PbI2 Terahertz Phonon-Polaritons]] +* [[MXene Scroll PbI2 THz Cavity]] +* [[Magnetic Super Lenses Superconductors]] +* [[Photon-Chased Ferrite Trace Formation]] +* [[Optical Codon Decoder]] diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Meta Manifold Language Merging.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Meta Manifold Language Merging.tid new file mode 100644 index 00000000..158a45f4 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Meta Manifold Language Merging.tid @@ -0,0 +1,11 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Lean Language Manifold +title: Meta Manifold Language Merging +type: text/vnd.tiddlywiki + +! Meta Manifold Language Merging + +Meta-Manifold Language Merging (`0-Core-Formalism/lean/Semantics/MetaManifoldLanguageMerging.lean`) constructs a meta-manifold from language manifolds, embedding each language in 5D torus topology with Menger sponge routing. Fold dynamics minimize cross-manifold energy. Includes Mass Number gates for admissibility and fold points between torus, Menger, and Gabriel's Horn structures. Paper: `6-Documentation/papers/OTOM/17_Meta_Manifold_Language_Merging.md`. + +Durable Source: `0-Core-Formalism/lean/Semantics/MetaManifoldLanguageMerging.lean` diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Motherboard Computational Substrate.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Motherboard Computational Substrate.tid new file mode 100644 index 00000000..ac580d8c --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Motherboard Computational Substrate.tid @@ -0,0 +1,11 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Hardware Compute Motherboard +title: Motherboard Computational Substrate +type: text/vnd.tiddlywiki + +! Motherboard Computational Substrate + +The motherboard computational substrate concept (`5-Applications/scripts/motherboard_computational.py`) treats the motherboard itself as a programmable computational fabric. Every bus, trace, and interface becomes an addressable compute resource. Integrates with the [[HDMI Compute Fabric]] for display-as-compute, the [[ASIC Topology]] for die-level routing, and PCIe computational controller for bus-level computation. Part of the hardware-as-compute strategy. + +Durable Source: `5-Applications/scripts/motherboard_computational.py` diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Networked Self Solving Space.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Networked Self Solving Space.tid new file mode 100644 index 00000000..7d97cf7e --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Networked Self Solving Space.tid @@ -0,0 +1,11 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Lean Distributed Quine +title: Networked Self Solving Space +type: text/vnd.tiddlywiki + +! Networked Self Solving Space + +Networked Self Solving Space (`0-Core-Formalism/lean/Semantics/Semantics/NetworkedSelfSolvingSpace.lean`) formalizes a distributed quine where the PIST manifold transitions across a 5D torus using Menger sponge fractal addressing. Key equations: distributed quine axiom, networked Lyapunov with communication cost, and Gossip(Prune(Expand(S_t))) master equation. The [[GlobalConsistency]] theorem proves invariance under torus hops. + +Durable Source: `0-Core-Formalism/lean/Semantics/Semantics/NetworkedSelfSolvingSpace.lean` diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Orthogonal AMMR.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Orthogonal AMMR.tid new file mode 100644 index 00000000..68bd2edc --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Orthogonal AMMR.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Orthogonal AMMR +type: text/vnd.tiddlywiki + +! Orthogonal AMMR + +Refers to [[OrthogonalAmmr.lean]]. The orthogonal-basis AMMR variant. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/OrthogonalAmmr.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/OrthogonalAmmr.lean.tid new file mode 100644 index 00000000..a1a27660 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/OrthogonalAmmr.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: OrthogonalAmmr.lean +type: text/vnd.tiddlywiki + +! OrthogonalAmmr.lean + +Alias/redirect. See [[Orthogonal AMMR]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/PbI2 Terahertz Phonon-Polaritons.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/PbI2 Terahertz Phonon-Polaritons.tid new file mode 100644 index 00000000..2e915e1c --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/PbI2 Terahertz Phonon-Polaritons.tid @@ -0,0 +1,52 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Materials Photonics Terahertz PbI2 Polaritons +title: PbI2 Terahertz Phonon-Polaritons +type: text/vnd.tiddlywiki + +! PbI2 Terahertz Phonon-Polaritons + +Lead iodide (PbI2) as a 2D lamellar crystal for terahertz-range photonic circuits. +Published in Nature Communications (2026), DOI: `10.1038/s41467-026-69027-6`. + +!! Key Findings + +* PbI2 supports high-quality-factor phonon-polaritons — hybrid light + lattice-vibration + quasiparticles that confine terahertz light into sub-wavelength volumes (<50nm from + a 200μm wave) +* Comparable quality factor to hexagonal boron nitride (hBN), the infrared reference + material, but in the terahertz regime where hBN cannot operate +* Synthesized by simple supersaturated aqueous solution + 80°C heating — no extreme + pressure/temperature conditions needed (unlike hBN) +* Enables operation beyond the diffraction limit via scattering-type near-field optical + microscopy (s-SNOM) with nanoscale metal tips acting as antennas +* Electric field density in s-SNOM probes up to 10^5× higher than free waves + +!! Relevance to Research Stack + +* `PbI2` is a perovskite precursor (ABX3 structure with I⁻ anion) — connects to perovskite + solar cell and optoelectronic degradation research +* Phonon-polariton confinement maps to the `[[Photon-Chased Ferrite Trace Formation]]` + concept of light-matter hybrid encoding +* Terahertz regime (100s GHz → THz) aligns with the `[[HDMI Compute Fabric]]` thesis + of using physical interfaces as high-bandwidth compute channels +* The Imbuia beamline at CNPEM (LNLS) is referenced in existing `shared-data` germane + research materials — PbI2 work extends this to the new Tatu terahertz line +* Simple crystallization method parallels the `[[MXene Nanoscrolls as Torsion Closure]]` + work on scalable 2D material synthesis + +!! Durable Source + +* Phys.org article: "Inexpensive material compresses light, paving the way for photonic + microcircuits in the terahertz range" (May 5, 2026) +* Original paper: `Nature Communications (2026)`, DOI: `10.1038/s41467-026-69027-6` + +!! Links + +* [[Materials and Hardware Mining]] +* [[Research Papers Index]] +* [[Photon-Chased Ferrite Trace Formation]] +* [[Optical Codon Decoder]] +* [[HDMI Compute Fabric]] +* [[MXene Nanoscrolls as Torsion Closure]] +* [[MXene Scroll PbI2 THz Cavity]] diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Phi Shell Encoding.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Phi Shell Encoding.tid new file mode 100644 index 00000000..0a3c5080 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Phi Shell Encoding.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Phi Shell Encoding +type: text/vnd.tiddlywiki + +! Phi Shell Encoding + +Alias for [[PIST Shell Encoding]] and [[Golden Angle Encoding]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Phinary Number System.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Phinary Number System.tid new file mode 100644 index 00000000..5589e6d9 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Phinary Number System.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Phinary Number System +type: text/vnd.tiddlywiki + +! Phinary Number System + +Alias for [[PIST Shell Encoding]] (phi-based number representation). diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Phonon Mediated Languages.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Phonon Mediated Languages.tid new file mode 100644 index 00000000..eea3fcc9 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Phonon Mediated Languages.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Phonon Mediated Languages +type: text/vnd.tiddlywiki + +! Phonon Mediated Languages + +Refers to `6-Documentation/papers/OTOM/14_Phonon_Mediated_Languages_Mined.md` and `0-Core-Formalism/lean/Semantics/Semantics/PhononMediatedLanguages.lean`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Physics Compression Bridge.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Physics Compression Bridge.tid new file mode 100644 index 00000000..abdb1e2b --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Physics Compression Bridge.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Physics Compression Bridge +type: text/vnd.tiddlywiki + +! Physics Compression Bridge + +Refers to `3-Mathematical-Models/physics_compression_bridge.md`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Psychopathy Cortical Surface Expansion.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Psychopathy Cortical Surface Expansion.tid new file mode 100644 index 00000000..551484ca --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Psychopathy Cortical Surface Expansion.tid @@ -0,0 +1,102 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Neuroscience Psychopathy CorticalSurface Empathy Morphometrics +title: Psychopathy Cortical Surface Expansion +type: text/vnd.tiddlywiki + +! Psychopathy and Cortical Surface Expansion + +Large-sample (n=804) structural MRI study linking psychopathy to expanded cortical +surface area and compressed structural brain gradients in incarcerated men. +Published in *Biological Psychiatry: Global Open Science* (2026). + +!! Key Findings + +* High psychopathy scores associated with increased total cortical surface area, + particularly in superior temporal, auditory, and paralimbic regions — areas + involved in social and emotional processing +* Surface area expansion was specific to psychopathy scores; not correlated with + self-reported empathy (Interpersonal Reactivity Index) +* Disentangled cortical thickness from surface area — two properties with different + developmental mechanisms (neuronal migration/folding vs laminar depth) +* Structural gradient compression: the continuous topographical map from primary + sensory to associative processing regions showed reduced differentiation +* The interpersonal/affective psychopathy factor linked to lower empathic concern; + the antisocial/lifestyle factor linked to impaired perspective-taking + +!! Method + +Mobile MRI scanner brought to correctional facilities in US Southwest and Midwest. +Psychopathy assessed via Psychopathy Checklist-Revised (PCL-R). Empathy via +Interpersonal Reactivity Index (IRI). Cortical parcellation into hundreds of regions +with separate thickness and surface area measurements. Structural gradient analysis +via diffusion map embedding of cortical morphology. + +!! Relevance to Research Stack + +*Surface area as a structural invariant:* The paper disentangles two anatomical +properties that develop under different constraints — surface area (set by +progenitor cell division and gyrification during fetal development) vs cortical +thickness (set by laminar differentiation and synaptic pruning through adolescence). +This is a biological example of a two-axis structural invariant where one axis can +be independently disturbed, directly analogous to the `[[AVMR Adaptive Vector Manifold Representation]]` +separation of manifold dimensions and the `[[Mass Number Theory]]` admissible/residual +tensor decomposition. + +*Gradient compression:* The compressed structural gradient — less differentiation +between the extremes of the sensory-to-associative axis — is a loss of manifold +resolution. In Research Stack terms, this is a reduction in the effective +dimensionality of the cortical manifold. Same mathematical structure as +`[[Semantic RG Flow]]` coarse-graining and `[[Manifold Flow]]` gradient collapse. +The measurement via diffusion map embedding of the structural covariance matrix +is the same technique underlying the `[[Semantic Eigenvector Bundle]]` pipeline. + +*Developmental folding constraints:* Cortical surface area is set by the number +of radial glial progenitor divisions during neurogenesis. Each division adds a +columnar unit to the cortical sheet. The expansion seen in psychopathy implies either +more progenitor divisions or reduced apoptosis during early development. This is a +growth-bounded structural invariant — same constraint class as the `[[Turing Pattern Prior]]` +in `[[Extremophile Constraint Layer]]` (finite nutrient flux bounds growth) and the +`[[Menger Sponge Fractal Addressing]]` volume-surface area relationship. + +*Paralimbic bridge:* The paralimbic system connects emotional processing (limbic) +to cognitive processing (neocortical). In psychopathy, this bridge region shows +structural expansion. This maps to the `[[Semantic Engine Binding Derivation]]` +concept of bridging between semantic domains, and the `[[NIICore Architecture]]` +hierarchical controller bridging morphic field layers. + +*Empathy decomposition:* The finding that different psychopathy factors dissociate +different empathy types (affective traits → empathic concern; behavioral traits → +perspective-taking) shows that empathy is not a unitary manifold. This supports the +Research Stack's approach of decomposing complex psychological constructs into +separable axes — same methodological principle as `[[Concept Vector 14]]` and +`[[AVMRClassification.lean]]`. + +*Self-report limitation:* The null correlation between brain structure and +self-reported empathy is notable. Self-report requires metacognitive access to +one's own empathic deficits — a capacity that psychopathy itself impairs. This is +an instance of a measurement system whose accuracy depends on the property being +measured, a self-referential problem familiar from the `[[Sigma Gate]]` and +`[[EpistemicHonesty.lean]]` frameworks. + +!! Integration with Existing Threads + +| Thread | Connection | +|--------|------------| +| `[[Brain as Manifold]]` | Cortical surface as a 2D manifold with measurable geometric properties | +| `[[AVMR Adaptive Vector Manifold Representation]]` | Surface area vs thickness as separable manifold axes | +| `[[Semantic RG Flow]]` | Gradient compression as coarse-graining of the cortical manifold | +| `[[Semantic Eigenvector Bundle]]` | Diffusion map embedding used for gradient analysis | +| `[[Extremophile Constraint Layer]]` | Turing Pattern Prior for growth-bounded structural development | +| `[[Mass Number Theory]]` | Surface area expansion as an admissible/residual tensor decomposition | +| `[[Menger Sponge Fractal Addressing]]` | Volume-surface area relationship in folded structures | +| `[[Semantic Engine Binding Derivation]]` | Paralimbic bridge as domain-binding architecture | +| `[[Sigma Gate]]` | Self-referential measurement problem in metacognitive assessment | +| `[[Concept Vector 14]]` | Empathy decomposition into separable psychological axes | +| `[[CognitiveLoad.lean]]` | Cortical structural constraints on cognitive capacity | + +!! Durable Source + +* Radecki et al. (2026), Biological Psychiatry: Global Open Science + DOI: `10.1016/j.bpsgos.2026.100695` +* PsyPost article by Karina Petrova, May 2, 2026 diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Quaternion Scalar.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Quaternion Scalar.tid new file mode 100644 index 00000000..c851f6dc --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Quaternion Scalar.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Quaternion Scalar +type: text/vnd.tiddlywiki + +! Quaternion Scalar + +Refers to [[QuaternionScalar.lean]]. Quaternion-based scalar field representation. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/QuaternionScalar.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/QuaternionScalar.lean.tid new file mode 100644 index 00000000..bc6ae5fd --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/QuaternionScalar.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: QuaternionScalar.lean +type: text/vnd.tiddlywiki + +! QuaternionScalar.lean + +Alias/redirect. See [[Quaternion Scalar]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Reality Contract Mass Number.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Reality Contract Mass Number.tid new file mode 100644 index 00000000..f5bae187 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Reality Contract Mass Number.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Reality Contract Mass Number +type: text/vnd.tiddlywiki + +! Reality Contract Mass Number + +Alias/redirect. See `RealityContractMassNumber.lean — sovereign reality contract enforcement`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/ReceiptCore.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/ReceiptCore.lean.tid new file mode 100644 index 00000000..12eb76a1 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/ReceiptCore.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: ReceiptCore.lean +type: text/vnd.tiddlywiki + +! ReceiptCore.lean + +Alias/redirect. See `Receipt Core (alias)`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Research Papers Index.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Research Papers Index.tid index 5f0e8f8d..c1d31515 100644 --- a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Research Papers Index.tid +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Research Papers Index.tid @@ -16,6 +16,8 @@ found in `/home/allaun/Documents/ingest/` and `/home/allaun/Documents/Research S * [[Paper rsif 2022 0562]] — J. R. Soc. Interface article (1258KB) * [[Malicious AI Swarms Democracy]] — AI swarm safety paper (248KB PDF) * [[Abelian Sandpile Model Article]] — [[Hybrid Abelian Non-Abelian Sandpile]] reference +* [[PbI2 Terahertz Phonon-Polaritons]] — Nature Communications 2026, terahertz photonics via lead iodide +* [[Magnetic Super Lenses Superconductors]] — PNAS 2026, atomic-scale imaging of cuprate superconductors !! Durable Sources @@ -28,3 +30,4 @@ found in `/home/allaun/Documents/ingest/` and `/home/allaun/Documents/Research S | Date | Action | |------|--------| | 2026-05-07 | Index created from `wiki_builder_shim` scan | +| 2026-05-07 | Added PbI2 terahertz phonon-polariton paper | diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/S3C Manifold Geometry.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/S3C Manifold Geometry.tid new file mode 100644 index 00000000..84b67ae4 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/S3C Manifold Geometry.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: S3C Manifold Geometry +type: text/vnd.tiddlywiki + +! S3C Manifold Geometry + +Alias for [[S3CManifoldGeometry.lean]]. See [[S3C MassPlus PIST Hyperbola]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/S3CManifoldGeometry.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/S3CManifoldGeometry.lean.tid new file mode 100644 index 00000000..f4cf4ac8 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/S3CManifoldGeometry.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: S3CManifoldGeometry.lean +type: text/vnd.tiddlywiki + +! S3CManifoldGeometry.lean + +Alias/redirect. See [[S3C Manifold Geometry]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Sabotage Prevention.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Sabotage Prevention.tid new file mode 100644 index 00000000..18cd9e76 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Sabotage Prevention.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Sabotage Prevention +type: text/vnd.tiddlywiki + +! Sabotage Prevention + +Refers to [[SabotagePrevention.lean]] and `5-Applications/scripts/sabotage_prevention.py`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/SabotagePrevention.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/SabotagePrevention.lean.tid new file mode 100644 index 00000000..2768ec17 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/SabotagePrevention.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: SabotagePrevention.lean +type: text/vnd.tiddlywiki + +! SabotagePrevention.lean + +Alias/redirect. See [[Sabotage Prevention]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Safety Gated Verification.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Safety Gated Verification.tid new file mode 100644 index 00000000..054b131d --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Safety Gated Verification.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Safety Gated Verification +type: text/vnd.tiddlywiki + +! Safety Gated Verification + +Refers to [[Safety-Gated Verification Plan]] at `6-Documentation/docs/SAFETY_GATED_VERIFICATION_PLAN.md`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Safety-Gated Verification Plan.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Safety-Gated Verification Plan.tid new file mode 100644 index 00000000..c8047869 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Safety-Gated Verification Plan.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Safety-Gated Verification Plan +type: text/vnd.tiddlywiki + +! Safety-Gated Verification Plan + +Alias/redirect. See [[Refers to SAFETY_GATED_VERIFICATION_PLAN.md (alias for [[Safety Gated Verification]])]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Semantic Search.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Semantic Search.tid new file mode 100644 index 00000000..cfda3000 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Semantic Search.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Semantic Search +type: text/vnd.tiddlywiki + +! Semantic Search + +Alias for [[Internal Semantic Search]], [[HNSW Vector Search]], and [[Semantic Graph Mining]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Sparkle Bridge.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Sparkle Bridge.tid new file mode 100644 index 00000000..dc493dbb --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Sparkle Bridge.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Sparkle Bridge +type: text/vnd.tiddlywiki + +! Sparkle Bridge + +Refers to [[SparkleBridge.lean]] and the S3C Sparkle integration. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/SparkleBridge.lean.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/SparkleBridge.lean.tid new file mode 100644 index 00000000..77cfd7f8 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/SparkleBridge.lean.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: SparkleBridge.lean +type: text/vnd.tiddlywiki + +! SparkleBridge.lean + +Alias/redirect. See [[Sparkle Bridge]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Swarm ENE Middleware.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Swarm ENE Middleware.tid index 56011deb..32028983 100644 --- a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Swarm ENE Middleware.tid +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Swarm ENE Middleware.tid @@ -6,7 +6,7 @@ type: text/vnd.tiddlywiki ! Swarm ENE Middleware -`4-Infrastructure/infra/swarm_ene_middleware.py` (427 lines) — middleware that hooks the Research Swarm API into the ENE database for query result caching, audit logging, and semantic retrieval. Maintains three SQLite tables: swarm_query_cache (TTL-based cache with hit counters), swarm_api_audit (operation log with timing), and swarm_semantic_index (14D concept vector index). Currently uses O(N) brute-force cosine similarity search. The cache stores 14D semantic vectors derived from query subjects via MD5 hashing. Part of the planned HNSW-based ANN upgrade (see [[HNSW Vector Search]] and the [[ENE Cognitive Refactor Plan]]). +`4-Infrastructure/infra/swarm_ene_middleware.py` (427 lines) — middleware that hooks the Research Swarm API into the ENE database for query result caching, audit logging, and semantic retrieval. Maintains three SQLite tables: swarm_query_cache (TTL-based cache with hit counters), swarm_api_audit (operation log with timing), and swarm_semantic_index (14D concept vector index). Currently uses O(N) brute-force cosine similarity search. The cache stores 14D semantic vectors derived from query subjects via MD5 hashing. Part of the planned HNSW-based ANN upgrade (see [[HNSW Vector Search]] and the [[ENe Cognitive Refactor Plan]]). !! Links diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Swarm MoE Rewiring.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Swarm MoE Rewiring.tid new file mode 100644 index 00000000..f14a9472 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Swarm MoE Rewiring.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Swarm MoE Rewiring +type: text/vnd.tiddlywiki + +! Swarm MoE Rewiring + +Alias/redirect. See `SwarmMoERewiring.lean — dynamic mixture-of-experts routing`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Text-to-CAD Viewer.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Text-to-CAD Viewer.tid new file mode 100644 index 00000000..1ed48c6c --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Text-to-CAD Viewer.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Text-to-CAD Viewer +type: text/vnd.tiddlywiki + +! Text-to-CAD Viewer + +React-based 3D CAD viewer at `5-Applications/text-to-cad/viewer/`. See [[Manifold Viewer]] for WebGL alternatives. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Topological State Machine.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Topological State Machine.tid index 3f75075c..faf71822 100644 --- a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Topological State Machine.tid +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Topological State Machine.tid @@ -6,7 +6,7 @@ type: text/vnd.tiddlywiki ! Topological State Machine -The Topological State Machine (TSM) is a geometric state-evolution framework that models manifold transitions as discrete steps through topological space. Core implementation: `5-Applications/scripts/topological_state_machine.py`. Extended variants: eigenvector TSM (`eigenvector_tsm_hyperfluid.py`), Hutter TSM (`hutter_eigenvector/`), and unified hypersurface TSM (`3-Mathematical-Models/unified_surface/`). State data stored in `3-Mathematical-Models/topological_state_machine/` with `tsm_report_*.json` outputs. Uses [[FAMM Fast Approximate Manifold Map]] for caching state transitions. Integration with Lean via `TopologicalStateMachine.lean`. The TSM cache directories (eigenvector_tsm, hutter_eigenvector) contain FAMM banks for fast manifold lookup. Referenced in the [[ENE Cognitive Refactor Plan]] Phase 6 for shell-partitioned cache eviction. +The Topological State Machine (TSM) is a geometric state-evolution framework that models manifold transitions as discrete steps through topological space. Core implementation: `5-Applications/scripts/topological_state_machine.py`. Extended variants: eigenvector TSM (`eigenvector_tsm_hyperfluid.py`), Hutter TSM (`hutter_eigenvector/`), and unified hypersurface TSM (`3-Mathematical-Models/unified_surface/`). State data stored in `3-Mathematical-Models/topological_state_machine/` with `tsm_report_*.json` outputs. Uses [[FAMM Fast Approximate Manifold Map]] for caching state transitions. Integration with Lean via `TopologicalStateMachine.lean`. The TSM cache directories (eigenvector_tsm, hutter_eigenvector) contain FAMM banks for fast manifold lookup. Referenced in the [[ENe Cognitive Refactor Plan]] Phase 6 for shell-partitioned cache eviction. * [[FAMM Fast Approximate Manifold Map]] * [[Lean Semantics Overview]] diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Triumvirate Enforcer.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Triumvirate Enforcer.tid new file mode 100644 index 00000000..1edb00d4 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Triumvirate Enforcer.tid @@ -0,0 +1,11 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Consensus Security Enforcement +title: Triumvirate Enforcer +type: text/vnd.tiddlywiki + +! Triumvirate Enforcer + +Triumvirate Enforcer (`0-Core-Formalism/lean/Semantics/Semantics/TriumvirateEnforcer.lean`) provides 3-party consensus enforcement for critical operations. Requires agreement from three independent verification nodes before any state-changing operation commits. Used by [[MoonRF ECP5 Hardware BFT Oracle]] for Byzantine fault tolerance and [[Session Record KDA-18 BFT Judge]] for judge-node consensus. + +Durable Source: `0-Core-Formalism/lean/Semantics/Semantics/TriumvirateEnforcer.lean` diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Weird Machine Video.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Weird Machine Video.tid new file mode 100644 index 00000000..1a11f73b --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Weird Machine Video.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Weird Machine Video +type: text/vnd.tiddlywiki + +! Weird Machine Video + +Refers to `The_Video_File_as_a_Self-Instantiating_Weird_Machi.md` in `extraction required/`. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Witness-Regularized Burgers/GPE.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Witness-Regularized Burgers/GPE.tid new file mode 100644 index 00000000..5b8f3960 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Witness-Regularized Burgers/GPE.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Witness-Regularized Burgers/GPE +type: text/vnd.tiddlywiki + +! Witness-Regularized Burgers/GPE + +Alias for [[Witness-Regularized Burgers GPE]]. diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Witness-Regularized Burgers_GPE.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Witness-Regularized Burgers_GPE.tid new file mode 100644 index 00000000..6ffc4f8d --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Witness-Regularized Burgers_GPE.tid @@ -0,0 +1,9 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Alias +title: Witness-Regularized Burgers/GPE +type: text/vnd.tiddlywiki + +! Witness-Regularized Burgers/GPE + +Alias/redirect. See [[Alias for [[Witness-Regularized Burgers GPE]]]].