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fix: regression test now actually exercises --staged in temp repo
Addresses Devin Review on PR #11 ("Staged regression test passes vacuously — git diff runs in real repo, not temp repo"). Root cause: scripts/math-first/require_math_evidence.py hardcoded cwd=REPO_ROOT on the git subprocess. REPO_ROOT is computed from __file__, which always resolves to the REAL repo path -- even when the test invokes the script with cwd=tmp_path. So 'git diff --cached --name-only' queried the real (clean) repo, returned an empty list, and the script exited 0 via the noop short-circuit. The regression test then printed OK while never actually exercising the --staged classification logic. Fix: Introduce _git_toplevel() in require_math_evidence.py that runs 'git rev-parse --show-toplevel' from the *inherited* cwd. Both _files_from_staged() and _files_from_git_diff() now use that toplevel as their subprocess cwd. Pre-commit and CI both invoke the script from inside the repo root anyway, so behaviour in production is unchanged; only the test (and any other caller that runs the script from a non-Research-Stack directory) now works correctly. Test hardening: test_require_math_evidence.py's staged regression now drives the script via plain subprocess with cwd=tmp_path (no runpy wrapper, no os.chdir trickery) and covers three sub-cases against the same temp repo: (a) math-track-only staged -> expect exit 1 (negative) (b) math-track + receipt staged -> expect exit 0 (the bug) (c) math-track + claims.yaml -> expect exit 0 (registry) Sub-case (a) is the key addition: with the pre-fix script, this case wrongly returns 0 (real repo is clean -> noop), so the test fails loudly. Verified locally by temporarily reverting the cwd fix -- the test correctly reports 'FAIL staged_regression_negative: expected exit 1, got 0'. Docs: docs/math-first-tooling.md notes that receipt-required-for-math-content is a no-op in the CI pre-commit job (pre-commit's --from-ref/--to-ref mode does not touch the index, so --staged returns an empty list and the hook exits 0). PR-scope enforcement of the same rule lives in the dedicated require-evidence CI job. This addresses the Devin Review info comment on .pre-commit-config.yaml. Co-Authored-By: Allaun Silverfox <bigdataiscoming+9i37y6j2@protonmail.com>
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parent
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commit
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3 changed files with 126 additions and 50 deletions
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@ -184,7 +184,11 @@ math-first surface. It has three jobs:
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3. **`pre-commit`** — runs every pre-commit hook against the PR's range of
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changed files (`pre-commit run --from-ref <base> --to-ref HEAD`), so the
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guardrails are honoured even when a contributor has not installed the
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hooks locally.
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hooks locally. Note: `receipt-required-for-math-content` is a no-op in
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this CI job because pre-commit's `--from-ref / --to-ref` mode does not
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stage anything in the index, so the script's `--staged` lookup returns
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an empty file list and exits 0. PR-scope enforcement of the same rule
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lives in the dedicated `require-evidence` job above.
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The pre-existing `wolfram-verification.yml` workflow continues to police
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mathematical formulas inside Lean source for missing Wolfram Alpha
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@ -40,8 +40,42 @@ import subprocess
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import sys
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from pathlib import Path
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# Only used for logging/help -- *not* as the subprocess ``cwd`` for the git
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# calls below. Hardcoding the subprocess cwd to this path caused the
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# regression test in ``test_require_math_evidence.py`` to pass vacuously
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# because the test stages files in a *temp* repo and expects ``git diff
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# --cached`` to query that temp repo, not the real one. Pre-commit and CI
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# both happen to invoke the script from inside the repo root, so letting
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# the git subprocess inherit cwd is correct in every real-world case.
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REPO_ROOT = Path(__file__).resolve().parents[2]
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def _git_toplevel(cwd: Path | None = None) -> Path:
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"""Return the absolute path of the git working tree containing ``cwd``.
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Defaults to the current working directory. The script never assumes the
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git repo lives at ``REPO_ROOT`` because that would be wrong when the
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script is run from a different working tree -- notably, the temp repo
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set up by ``test_require_math_evidence.py``.
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"""
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cmd = ["git", "rev-parse", "--show-toplevel"]
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try:
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result = subprocess.run(
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cmd,
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capture_output=True,
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text=True,
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check=True,
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cwd=str(cwd) if cwd is not None else None,
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)
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except subprocess.CalledProcessError as exc:
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print(
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f"error: `{' '.join(cmd)}` failed: {exc.stderr.strip()}",
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file=sys.stderr,
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)
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raise SystemExit(2)
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return Path(result.stdout.strip())
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MATH_TRACK_PREFIXES: tuple[str, ...] = (
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"0-Core-Formalism/lean/Semantics/",
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"6-Documentation/docs/distilled/",
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@ -82,9 +116,12 @@ def _is_evidence(path: str) -> bool:
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def _files_from_git_diff(base_ref: str) -> list[str]:
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cwd = _git_toplevel()
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cmd = ["git", "diff", "--name-only", f"{base_ref}...HEAD"]
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try:
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result = subprocess.run(cmd, capture_output=True, text=True, check=True, cwd=REPO_ROOT)
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result = subprocess.run(
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cmd, capture_output=True, text=True, check=True, cwd=str(cwd)
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)
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except subprocess.CalledProcessError as exc:
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print(f"error: `{' '.join(cmd)}` failed: {exc.stderr.strip()}", file=sys.stderr)
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raise SystemExit(2)
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@ -99,10 +136,17 @@ def _files_from_staged() -> list[str]:
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``files`` filter. This is important because pre-commit otherwise strips
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receipts and ``claims.yaml`` from the argv before the script ever sees
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them, which would cause the evidence check to falsely fail.
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The subprocess cwd is the actual git toplevel containing the *current*
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working directory, not a hardcoded path -- so the script works
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correctly inside the regression test's temp repo too.
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"""
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cwd = _git_toplevel()
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cmd = ["git", "diff", "--cached", "--name-only"]
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try:
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result = subprocess.run(cmd, capture_output=True, text=True, check=True, cwd=REPO_ROOT)
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result = subprocess.run(
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cmd, capture_output=True, text=True, check=True, cwd=str(cwd)
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)
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except subprocess.CalledProcessError as exc:
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print(f"error: `{' '.join(cmd)}` failed: {exc.stderr.strip()}", file=sys.stderr)
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raise SystemExit(2)
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@ -123,71 +123,99 @@ def _run_mutex_check() -> int:
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def _run_staged_regression() -> int:
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"""Regression test: ``--staged`` sees the entire index, not just argv.
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"""Regression for the pre-commit ``files``-filter bug.
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Reproduces the pre-commit ``files`` filter bug. Without ``--staged``
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invoking the script with only the math-track filename (as pre-commit
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would, after filtering) would falsely fail. With ``--staged`` the
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script reads the full index and passes.
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Builds a throwaway git repo so this test is self-contained -- the
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test does not depend on the state of the real repo's index. The
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script is run with ``cwd=tmp_path`` (NOT via ``runpy``) so that
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``git rev-parse --show-toplevel`` inside the script resolves to the
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temp repo, and ``git diff --cached`` queries the temp repo's index.
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Three sub-cases:
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(a) math-track-only staged -> expect exit 1
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(proves the script actually evaluates classification logic;
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without (a) the next sub-case could pass vacuously by
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short-circuiting on an empty diff)
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(b) math-track + receipt staged -> expect exit 0
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(the original pre-commit ``files``-filter bug)
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(c) math-track + claims.yaml staged -> expect exit 0
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(verifies the registry-update path)
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"""
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failures = 0
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with tempfile.TemporaryDirectory() as tmp:
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tmp_path = Path(tmp)
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tmp_path = Path(tmp).resolve()
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_git("init", "-q", cwd=tmp_path)
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# Lay out a minimal mirror of the math-track and evidence surfaces.
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math_track = tmp_path / "6-Documentation" / "docs" / "distilled" / "Spec.md"
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math_track.parent.mkdir(parents=True, exist_ok=True)
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math_track.write_text("# math claim\n")
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receipt = (
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tmp_path
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/ "shared-data"
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/ "artifacts"
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/ "deepseek_review"
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/ "x.receipt.json"
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tmp_path / "shared-data" / "artifacts" / "deepseek_review" / "x.receipt.json"
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)
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receipt.parent.mkdir(parents=True, exist_ok=True)
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receipt.write_text("{}\n")
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# Stage both files. (The script does not parse the receipts here --
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# it only classifies by path.)
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_git("add", str(math_track.relative_to(tmp_path)), cwd=tmp_path)
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_git("add", str(receipt.relative_to(tmp_path)), cwd=tmp_path)
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claims = tmp_path / "claims.yaml"
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claims.write_text("claims: []\n")
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# Run with --staged from inside the temp repo. The script will
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# rebase REPO_ROOT off its own location (the real repo), but the
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# ``git diff --cached`` call uses subprocess cwd, which we override
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# below by chdir-ing.
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# We invoke the script with a small wrapper script so we control cwd.
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wrapper = tmp_path / "run_wrapper.py"
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wrapper.write_text(
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"import os, runpy, sys\n"
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f"os.chdir({str(tmp_path)!r})\n"
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"sys.argv = ['require_math_evidence.py', '--staged']\n"
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f"runpy.run_path({str(SCRIPT)!r}, run_name='__main__')\n"
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def _stage_only(*relpaths: str) -> None:
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# Reset the index to a clean state, then stage exactly the
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# supplied paths. ``git reset`` is safe here -- the temp repo
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# has no commits, so there is no "HEAD" to reset against. We
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# instead remove everything currently in the index.
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_git("rm", "--cached", "-rf", "--ignore-unmatch", ".", cwd=tmp_path)
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for relpath in relpaths:
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_git("add", "--", relpath, cwd=tmp_path)
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def _invoke() -> subprocess.CompletedProcess[str]:
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return subprocess.run(
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[sys.executable, str(SCRIPT), "--staged"],
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capture_output=True,
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text=True,
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cwd=str(tmp_path),
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)
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def _assert(label: str, expected_exit: int, *staged: str) -> int:
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_stage_only(*staged)
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indexed = _git("diff", "--cached", "--name-only", cwd=tmp_path).stdout.splitlines()
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indexed = [line for line in indexed if line.strip()]
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if sorted(indexed) != sorted(staged):
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print(f"FAIL {label}: index does not match expected staging")
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print(f" expected: {sorted(staged)}")
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print(f" actual: {sorted(indexed)}")
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return 1
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result = _invoke()
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if result.returncode != expected_exit:
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print(
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f"FAIL {label}: expected exit {expected_exit}, "
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f"got {result.returncode}"
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)
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if result.stdout.strip():
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print(f" stdout: {result.stdout.strip()}")
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if result.stderr.strip():
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print(f" stderr: {result.stderr.strip()}")
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return 1
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print(f"OK {label} (exit {expected_exit})")
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return 0
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failures += _assert(
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"staged_regression_negative (math-only -> FAIL)",
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1,
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"6-Documentation/docs/distilled/Spec.md",
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)
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result = subprocess.run(
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[sys.executable, str(wrapper)],
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capture_output=True,
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text=True,
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cwd=str(tmp_path),
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failures += _assert(
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"staged_regression_positive_receipt (math + receipt -> OK)",
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0,
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"6-Documentation/docs/distilled/Spec.md",
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"shared-data/artifacts/deepseek_review/x.receipt.json",
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)
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failures += _assert(
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"staged_regression_positive_claims (math + claims.yaml -> OK)",
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0,
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"6-Documentation/docs/distilled/Spec.md",
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"claims.yaml",
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)
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# The script's REPO_ROOT is computed from its own __file__ (the real
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# repo), so it would join 6-Documentation/... onto the real repo
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# path. That's fine -- ``_is_math_track`` and ``_is_evidence``
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# operate on path *strings*, not on disk existence. The relevant
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# invariant is that the staged file list (computed via
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# ``git diff --cached`` in tmp_path) contains BOTH files.
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if result.returncode != 0:
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failures += 1
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print("FAIL staged_regression: expected exit 0, got", result.returncode)
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if result.stdout.strip():
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print(f" stdout: {result.stdout.strip()}")
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if result.stderr.strip():
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print(f" stderr: {result.stderr.strip()}")
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else:
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print("OK staged_regression (math-track + receipt both staged -> exit 0)")
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return failures
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