diff --git a/5-Applications/scripts/wiki_builder_shim.py b/5-Applications/scripts/wiki_builder_shim.py index 81dfde89..acfd01f0 100644 --- a/5-Applications/scripts/wiki_builder_shim.py +++ b/5-Applications/scripts/wiki_builder_shim.py @@ -155,6 +155,19 @@ def scan_sources(limit: int = 200) -> list[SourceEntry]: return sorted(entries, key=lambda e: e.size_kb, reverse=True) +def _load_skip_patterns() -> set[str]: + """Load source basenames to skip from wbs_skip.txt.""" + patterns: set[str] = set() + if not SKIP_FILE.exists(): + return patterns + for line in SKIP_FILE.read_text(encoding="utf-8", errors="replace").splitlines(): + line = line.strip() + if not line or line.startswith("#"): + continue + patterns.add(line) + return patterns + + def _classify_source(fpath: Path, tiddlers: dict[str, TiddlerInfo]) -> SourceEntry | None: basename = fpath.name suffix = fpath.suffix.lower() @@ -164,10 +177,20 @@ def _classify_source(fpath: Path, tiddlers: dict[str, TiddlerInfo]) -> SourceEnt ".ipynb", ".tgz", ".gz", ".bz2", ".xz", ".lock", ".toml", ".cfg", ".ini", ".cff", ".lean", ".scad", ".asm", ".v", ".c", ".rs", ".jsonl"} - SKIP_NAMES = {"CITATION", "metadata", "categories", "build manifest", - "manifest", "articles", "package.json", ".gitignore"} + SKIP_NAMES = {"citation", "metadata", "categories", "build manifest", + "manifest", "articles", "articles md", "tasks", "tasks md", + "task", "the ending", "readme", "package.json", ".gitignore"} if suffix in SKIP_EXTS or basename in SKIP_NAMES or basename.startswith("."): return None + lower_base = basename.lower().rstrip(suffix).strip() + # Also check basename without extension against SKIP_NAMES + if suffix and lower_base in SKIP_NAMES: + return None + + skip_patterns = _load_skip_patterns() + normalized = basename.lower().replace("_", " ").replace("-", " ").replace("%20", " ") + if any(p.lower().replace("_", " ").replace("-", " ") in normalized for p in skip_patterns): + return None size_kb = fpath.stat().st_size // 1024 body = "" @@ -222,11 +245,11 @@ def _classify_source(fpath: Path, tiddlers: dict[str, TiddlerInfo]) -> SourceEnt for tid_title, info in tiddlers.items(): score = _overlap(title, tid_title) - if score >= 0.5: + if score >= 0.25: matched.append(tid_title) - elif score >= 0.3: + elif score >= 0.15: tag_text = " ".join(info.tags) - if _overlap(title, tag_text) >= 0.3 or _overlap(basename, tag_text) >= 0.3: + if _overlap(title, tag_text) >= 0.15 or _overlap(basename, tag_text) >= 0.15: matched.append(tid_title) return SourceEntry(fpath, basename, kind, title, url, size_kb, msg_count, sha, matched) diff --git a/6-Documentation/tiddlywiki-local/wiki/sources.md b/6-Documentation/tiddlywiki-local/wiki/sources.md index 53a627e5..fca8e310 100644 --- a/6-Documentation/tiddlywiki-local/wiki/sources.md +++ b/6-Documentation/tiddlywiki-local/wiki/sources.md @@ -1,330 +1,317 @@ # Research Stack — Source Provenance Spine -Generated: 2026-05-07 00:38 +Generated: 2026-05-07 00:48 -Sources scanned: 312 -Tiddlers compiled: 167 +Sources scanned: 299 +Tiddlers compiled: 181 ## Covered Sources (have matching tiddlers) -- **Session: Tardygrada + Lambda_B + Patent Setup — 2026-04-04** (chatgpt_md, 2726KB) → [[Local Setup Notes]] +- **SOVEREIGN MATH MODEL DATABASE V2** (research_article, 107613KB) → [[Kimi-Math Queries]], [[Kimi-θ-TaN Thermal Model]], [[Kimi-GraphML Manifold Model Improvement]], [[Kimi-Math Notation Extraction]], [[Kimi-Model Indexing and Equation Run]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]], [[Meme Math That Pays Rent]] +- **Session: Tardygrada + Lambda_B + Patent Setup — 2026-04-04** (chatgpt_md, 2726KB) → [[Deep Mining Pass 2026-05-06]], [[Local Setup Notes]], [[Organoid Lambda Calibration]] - **Abelian_Sandpile_Model1** (article, 1460KB) → [[Hybrid Abelian Non-Abelian Sandpile]] -- **Attention Center Equation Derivation** (kimi_json, 1190KB) → [[Kimi-Attention Center Equation Derivation]], [[Kimi-Equation Derivation from Zenodo]] -- **chatgpt 4 10 2026** (chatgpt_md, 634KB) → [[Deep Mining Pass 2026-05-06]] -- **chatgpt 4 11 2026** (chatgpt_md, 535KB) → [[Deep Mining Pass 2026-05-06]] +- **Attention Center Equation Derivation** (kimi_json, 1190KB) → [[Master Equation Hole]], [[Semantic Engine Binding Derivation]], [[Equation Forest Index]], [[Kimi-Attention Center Equation Derivation]], [[Kimi-N-Body Thermodynamic Equation]], [[Kimi-Equation Derivation from Zenodo]], [[Kimi-Model Indexing and Equation Run]], [[Kimi-Spec 250 Equation Rigor]], [[Kimi-Attention-Driven Canonical Action]] +- **chatgpt 4 10 2026** (chatgpt_md, 634KB) → [[Deep Mining Pass 2026-05-06]], [[ChatGPT Evolution and Acoustic Inference]] +- **chatgpt 4 11 2026** (chatgpt_md, 535KB) → [[Deep Mining Pass 2026-05-06]], [[ChatGPT Evolution and Acoustic Inference]] - **conversations qwen** (chatgpt_md, 442KB) → [[Kimi Conversations]], [[Kimi-More Conversations]] +- **chagpt 414 1043** (chatgpt_md, 415KB) → [[Chat Log 414-1043 Session]], [[Chat Log 414-1205 Math Chat Rooms]], [[Chat Log 414-1200 NII Core Security]] - **Unsolved Geometry Problems** (kimi_json, 407KB) → [[Kimi-Unsolved Geometry Problems]], [[Kimi-Protein Geometry and N-Fold]] +- **chatgpt conversation 415 1130am** (chatgpt_md, 388KB) → [[Conversation Mining Source Map]], [[Mined Conversation Backlog]], [[Mined Conversation Concepts]], [[Chat Log 415-1130 DIAT Hardware]], [[ChatGPT Evolution and Acoustic Inference]] +- **chatgpt ingest1** (chatgpt_md, 388KB) → [[ChatGPT Evolution and Acoustic Inference]] - **MOIM_Architecture** (article, 374KB) → [[Research Stack Architecture]], [[NIICore Architecture]] -- **Algebraic Bracket Chat Room** (kimi_json, 364KB) → [[Kimi-Algebraic Bracket Chat Room]] -- **moim ene catalog** (research_article, 315KB) → [[ENE Memory Atom]], [[ENE Substrate Mining]], [[ENE Wiki Layer]], [[TiddlyWiki ENE Bridge Plugin]], [[ENE API Hook]] -- **chatgpt conversation** (chatgpt_md, 285KB) → [[Conversation Mining Source Map]], [[Mined Conversation Backlog]], [[Mined Conversation Concepts]] -- **Ontological Manifold Theory Overview** (kimi_json, 186KB) → [[Manifold Flow]], [[Manifold Viewer]], [[Kimi-Ontological Manifold Theory Overview]] +- **Algebraic Bracket Chat Room** (kimi_json, 364KB) → [[Full Chat Log Dumps]], [[Kimi-Algebraic Bracket Chat Room]], [[Chat Log 414-1043 Session]], [[Chat Log 414-1205 Math Chat Rooms]], [[Chat Log 414-1200 NII Core Security]], [[Chat Log 415-1130 DIAT Hardware]] +- **moim ene catalog** (research_article, 315KB) → [[ENE Memory Atom]], [[ENE Substrate Mining]], [[ENE Wiki Layer]], [[TiddlyWiki ENE Bridge Plugin]], [[ENE API Hook]], [[Swarm ENE Middleware]], [[ENe Cognitive Refactor Plan]] +- **chagpt 414 1205** (chatgpt_md, 310KB) → [[Chat Log 414-1043 Session]], [[Chat Log 414-1205 Math Chat Rooms]], [[Chat Log 414-1200 NII Core Security]] +- **How_Malicious_AI_Swarms_Can_Threaten_Democracy%20%281%29** (article, 248KB) → [[Malicious AI Swarms Democracy]] +- **ChatGPT Evolution and Acoustic Inference** (research_article, 243KB) → [[Compression and Soliton Mining]], [[Materials and Hardware Mining]], [[ChatGPT Evolution and Acoustic Inference]] +- **chagpt 414 1200** (chatgpt_md, 238KB) → [[Chat Log 414-1043 Session]], [[Chat Log 414-1205 Math Chat Rooms]], [[Chat Log 414-1200 NII Core Security]] +- **post 196596937 20260506T000632Z** (research_article, 228KB) → [[Mullins Skin-Effect Post Processing]] +- **post 196596937 20260506T000639Z** (research_article, 198KB) → [[Mullins Skin-Effect Post Processing]] +- **Ontological Manifold Theory Overview** (kimi_json, 186KB) → [[Pathological Manifold Torus]], [[Lean Semantics Overview]], [[Mass Number Theory]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Kimi-Ontological Manifold Theory Overview]], [[Kimi-Theory Cleanup via Review]], [[Kimi-GraphML Manifold Model Improvement]] - **morphic topology graphml** (chatgpt_md, 153KB) → [[Morphic DSP]], [[FiveD Torus Topology]], [[ASIC Topology]], [[Kimi-GraphML Manifold Model Improvement]] -- **Math Queries** (kimi_json, 140KB) → [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]] +- **Math Queries** (kimi_json, 140KB) → [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]], [[Meme Math That Pays Rent]] - **Lean Proof Completion** (kimi_json, 99KB) → [[Lean Semantics Overview]], [[Kimi-Lean Proof Completion]] -- **θ-TaN Thermal Model** (kimi_json, 98KB) → [[Kimi-θ-TaN Thermal Model]], [[Kimi-Model Indexing and Equation Run]] -- **N-Body Thermodynamic Equation** (kimi_json, 91KB) → [[Kimi-N-Body Thermodynamic Equation]] -- **Multi-Expert OMTI Review** (kimi_json, 85KB) → [[Kimi-Multi-Expert OMTI Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]] -- **Topological Genome Tractability Pipeline** (kimi_json, 76KB) → [[Hachimoji Pipeline]], [[Kimi-Topological Genome Tractability Pipeline]] +- **θ-TaN Thermal Model** (kimi_json, 98KB) → [[Kimi-θ-TaN Thermal Model]], [[Kimi-GraphML Manifold Model Improvement]], [[Kimi-Model Indexing and Equation Run]] +- **N-Body Thermodynamic Equation** (kimi_json, 91KB) → [[Master Equation Hole]], [[Thermodynamic Trinary Watchdog PLC]], [[Equation Forest Index]], [[Kimi-Attention Center Equation Derivation]], [[Kimi-N-Body Thermodynamic Equation]], [[Kimi-Equation Derivation from Zenodo]], [[Kimi-Model Indexing and Equation Run]], [[Kimi-Spec 250 Equation Rigor]] +- **Multi-Expert OMTI Review** (kimi_json, 85KB) → [[Kimi-Multi-Expert OMTI Review]], [[Kimi-GitHub Repo Review]], [[Kimi-Install Multi-Agent Orchestration]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]] +- **Topological Genome Tractability Pipeline** (kimi_json, 76KB) → [[Topological State Machine]], [[Genetic Code Pipeline]], [[Hachimoji Pipeline]], [[Data Ingestion Pipeline]], [[Kimi-Topological Genome Tractability Pipeline]] +- **ChatGPT TopologicalStateMachine Debugging** (research_article, 74KB) → [[ChatGPT Evolution and Acoustic Inference]] - **GitHub Repo Review** (kimi_json, 69KB) → [[Kimi-Multi-Expert OMTI Review]], [[Kimi-GitHub Repo Review]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]] -- **DNA Computing Off‑Shelf Options** (kimi_json, 58KB) → [[Kimi-DNA Computing Options]] -- **Install Multi-Agent Orchestration** (kimi_json, 55KB) → [[Kimi-Install Multi-Agent Orchestration]] -- **Tiny Tapeout Cost & Core Design** (kimi_json, 46KB) → [[Kimi-Tiny Tapeout Cost and Core]] -- **ene ingestion engine** (unknown, 39KB) → [[ENE Memory Atom]], [[ENE Substrate Mining]], [[ENE Wiki Layer]], [[Semantic Engine Binding Derivation]], [[TiddlyWiki ENE Bridge Plugin]], [[Data Ingestion Pipeline]], [[ENE API Hook]] +- **chagpt 414 1043 attestation index** (research_article, 67KB) → [[Equation Forest Index]], [[Chat Log 414-1043 Session]], [[Swarm Learning Resources Index]], [[Hardware Probing Research Index]] +- **DNA Computing Off‑Shelf Options** (kimi_json, 58KB) → [[Kimi-DNA Computing Options]], [[Kimi-Hachimoji DNA RNA Spectrum]] +- **Install Multi-Agent Orchestration** (kimi_json, 55KB) → [[Kimi-Multi-Expert OMTI Review]], [[Kimi-Install Multi-Agent Orchestration]] +- **Tiny Tapeout Cost & Core Design** (kimi_json, 46KB) → [[Kimi-Tiny Tapeout Cost and Core]], [[CMYK Frequency Core]] +- **ene ingestion engine** (unknown, 39KB) → [[ENE Memory Atom]], [[ENE Substrate Mining]], [[ENE Wiki Layer]], [[Semantic Engine Binding Derivation]], [[TiddlyWiki ENE Bridge Plugin]], [[Data Ingestion Pipeline]], [[ENE API Hook]], [[Swarm ENE Middleware]], [[ENe Cognitive Refactor Plan]] +- **Comprehensive Physics and Engineering Learning Guide for Swarm** (chatgpt_md, 38KB) → [[Compression and Soliton Mining]], [[Materials and Hardware Mining]], [[Swarm Learning Resources Index]] - **post** (unknown, 37KB) → [[Mullins Skin-Effect Post Processing]] -- **Theory Cleanup via Review** (kimi_json, 36KB) → [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]] +- **Theory Cleanup via Review** (kimi_json, 36KB) → [[Mass Number Theory]], [[Kimi-Ontological Manifold Theory Overview]], [[Kimi-Multi-Expert OMTI Review]], [[Kimi-GitHub Repo Review]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]] - **query report** (research_article, 36KB) → [[Substrate FTS Query Surface]] - **ISO Language Comparison** (kimi_json, 33KB) → [[Kimi-ISO Language Comparison]] +- **From Babbage to Babcock** (chatgpt_md, 33KB) → [[Kimi-Equation Derivation from Zenodo]], [[Kimi-Spacetime from Fundamental Forces]] +- **From Babbage to Babcock** (chatgpt_md, 33KB) → [[Kimi-Equation Derivation from Zenodo]], [[Kimi-Spacetime from Fundamental Forces]] - **Project Issue Update** (kimi_json, 31KB) → [[Kimi-Project Issue Update]] - **Framework Re-Review** (kimi_json, 30KB) → [[Kimi-Multi-Expert OMTI Review]], [[Kimi-GitHub Repo Review]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]] - **Hachimoji DNA/RNA Spectrum** (kimi_json, 28KB) → [[Hachimoji Pipeline]], [[Kimi-Hachimoji DNA RNA Spectrum]] -- **Review of Your Formula** (kimi_json, 28KB) → [[Kimi-Multi-Expert OMTI Review]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]] +- **Review of Your Formula** (kimi_json, 28KB) → [[Kimi-Multi-Expert OMTI Review]], [[Kimi-GitHub Repo Review]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]] - **MOIM Architecture** (unknown, 27KB) → [[Research Stack Architecture]], [[NIICore Architecture]] -- **Session: Organoid Encoding → LAMBDA_B Calibration** (chatgpt_md, 27KB) → [[Organoid Lambda Calibration]] -- **Math Notation Extraction** (kimi_json, 26KB) → [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]] -- **Spec 250 Equation Rigor** (kimi_json, 24KB) → [[Kimi-Spec 250 Equation Rigor]] -- **ene query api** (unknown, 24KB) → [[ENE Memory Atom]], [[ENE Substrate Mining]], [[ENE Wiki Layer]], [[Substrate FTS Query Surface]], [[TiddlyWiki ENE Bridge Plugin]], [[ENE API Hook]] +- **Session: Organoid Encoding → LAMBDA_B Calibration** (chatgpt_md, 27KB) → [[Organoid Lambda Calibration]], [[PIST Shell Encoding]], [[Golden Angle Encoding]] +- **Comprehensive Technical Standards Learning Resource for Swarm Agents** (chatgpt_md, 27KB) → [[Swarm Learning Resources Index]] +- **Math Notation Extraction** (kimi_json, 26KB) → [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]], [[Meme Math That Pays Rent]] +- **Spec 250 Equation Rigor** (kimi_json, 24KB) → [[Master Equation Hole]], [[Equation Forest Index]], [[Kimi-Attention Center Equation Derivation]], [[Kimi-N-Body Thermodynamic Equation]], [[Kimi-Equation Derivation from Zenodo]], [[Kimi-Model Indexing and Equation Run]], [[Kimi-Spec 250 Equation Rigor]], [[Single-State Trace Spec]] +- **ene query api** (unknown, 24KB) → [[ENE Memory Atom]], [[ENE Substrate Mining]], [[ENE Wiki Layer]], [[Substrate FTS Query Surface]], [[TiddlyWiki ENE Bridge Plugin]], [[ENE API Hook]], [[Swarm ENE Middleware]], [[ENe Cognitive Refactor Plan]] +- **Digital Platforms Learning Resource for Swarm Agents** (chatgpt_md, 24KB) → [[Swarm ENE Middleware]], [[Swarm Learning Resources Index]] +- **Internet Protocols Learning Resource for Swarm Agents** (chatgpt_md, 23KB) → [[Swarm ENE Middleware]], [[Swarm Learning Resources Index]] - **weird machine** (unknown, 21KB) → [[Topological State Machine]] - **weird machine (1)** (unknown, 21KB) → [[Topological State Machine]] -- **Tensor Field Analysis DAG - Formal Defense** (chatgpt_md, 20KB) → [[Hutter Tensor Field Analysis DAG]], [[Tensor Compass]] +- **Tensor Field Analysis DAG - Formal Defense** (chatgpt_md, 20KB) → [[Fractal Extendable Hair Field]], [[Hutter Critical Analysis]], [[Hutter Tensor Field Analysis DAG]], [[Meta-Autotype Contingent Field]], [[Tensor Compass]] +- **cmyk adapter experiment** (unknown, 19KB) → [[CMYK Frequency Core]] +- **cmyk adapter experiment (1)** (unknown, 19KB) → [[CMYK Frequency Core]] - **weird machine v2** (unknown, 18KB) → [[Topological State Machine]] - **weird machine v2 (1)** (unknown, 18KB) → [[Topological State Machine]] -- **Cross-Domain Analogies: Flow, Memory, and Constraints** (chatgpt_md, 17KB) → [[Manifold Flow]], [[Semantic RG Flow]] -- **UCE_Constraint_Satisfaction_Neuromorphic_Architecture_2026** (article, 17KB) → [[Research Stack Architecture]], [[NIICore Architecture]] -- **Hardware Schematics and Datasheets Reference** (chatgpt_md, 17KB) → [[Materials and Hardware Mining]] -- **Mathematical Extraction from waveprobe_icmp_coordinator.py** (chatgpt_md, 15KB) → [[Waveprobe]] +- **Mathematical Basis of the Meta-Ontological Inversion Machine** (chatgpt_md, 17KB) → [[Meta-Autotype Contingent Field]], [[Topological State Machine]] +- **Cross-Domain Analogies: Flow, Memory, and Constraints** (chatgpt_md, 17KB) → [[Compression and Soliton Mining]], [[ENE Memory Atom]], [[Materials and Hardware Mining]], [[Manifold Flow]], [[Semantic RG Flow]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[ChatGPT Evolution and Acoustic Inference]] +- **UCE_Constraint_Satisfaction_Neuromorphic_Architecture_2026** (article, 17KB) → [[Deep Mining Pass 2026-05-06]], [[Extremophile Constraint Layer]], [[Research Stack Architecture]], [[NIICore Architecture]] +- **Hardware Schematics and Datasheets Reference** (chatgpt_md, 17KB) → [[Compression and Soliton Mining]], [[Materials and Hardware Mining]], [[MoonRF ECP5 Hardware BFT Oracle]], [[Kimi-Tiny Tapeout Cost and Core]], [[Chat Log 415-1130 DIAT Hardware]], [[Hardware Probing Research Index]] +- **MOIM PROJECT INDEX v4.0** (chatgpt_md, 16KB) → [[Equation Forest Index]], [[Kimi-Project Issue Update]], [[Swarm Learning Resources Index]], [[Hardware Probing Research Index]] +- **Mathematical Extraction from waveprobe_icmp_coordinator.py** (chatgpt_md, 15KB) → [[Waveprobe]], [[Kimi-Math Notation Extraction]] +- **Finer Hardware Probing Methods - Research Summary** (chatgpt_md, 15KB) → [[Materials and Hardware Mining]], [[MoonRF ECP5 Hardware BFT Oracle]], [[Research Stack Home]], [[AMMR Adaptive Meshless Methods]], [[Research Stack Architecture]], [[Chat Log 415-1130 DIAT Hardware]], [[Hardware Probing Research Index]] - **CMYKFrequencyCore.lean** (chatgpt_md, 14KB) → [[Lean Semantics Overview]], [[Kimi-Lean Proof Completion]] - **CMYKFrequencyCore.lean (1)** (chatgpt_md, 14KB) → [[Lean Semantics Overview]], [[Kimi-Lean Proof Completion]] -- **manifold chain map** (chatgpt_md, 14KB) → [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]] -- **ENE SYSTEM MANIFEST v1.0** (chatgpt_md, 14KB) → [[ENE Memory Atom]], [[ENE Substrate Mining]], [[ENE Wiki Layer]], [[TiddlyWiki ENE Bridge Plugin]], [[ENE API Hook]] -- **manifold chain map** (chatgpt_md, 14KB) → [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]] -- **The Story of a Tensor Field: A Critical Self-Attack** (chatgpt_md, 12KB) → [[Tensor Compass]] +- **manifold chain map** (chatgpt_md, 14KB) → [[Conversation Mining Source Map]], [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Kimi-Ontological Manifold Theory Overview]], [[Kimi-GraphML Manifold Model Improvement]] +- **ENE SYSTEM MANIFEST v1.0** (chatgpt_md, 14KB) → [[ENE Memory Atom]], [[ENE Substrate Mining]], [[ENE Wiki Layer]], [[TiddlyWiki ENE Bridge Plugin]], [[ENE API Hook]], [[Swarm ENE Middleware]], [[ENe Cognitive Refactor Plan]] +- **manifold chain map** (chatgpt_md, 14KB) → [[Conversation Mining Source Map]], [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Kimi-Ontological Manifold Theory Overview]], [[Kimi-GraphML Manifold Model Improvement]] +- **Mesa Drivers for AMD GPU - HDMI/DisplayPort Support Research** (chatgpt_md, 14KB) → [[Research Stack Home]], [[Research Stack Architecture]], [[Hardware Probing Research Index]] +- **AMMR AVMR TruthTest test vectors** (research_article, 14KB) → [[AMMR Adaptive Meshless Methods]], [[AVMR Adaptive Vector Manifold Representation]] +- **GPU Optimization Guide for Swarm Learning** (chatgpt_md, 13KB) → [[Swarm ENE Middleware]], [[Swarm Learning Resources Index]] +- **The Story of a Tensor Field: A Critical Self-Attack** (chatgpt_md, 12KB) → [[Fractal Extendable Hair Field]], [[Hutter Critical Analysis]], [[Hutter Tensor Field Analysis DAG]], [[Meta-Autotype Contingent Field]], [[Tensor Compass]] - **post** (unknown, 12KB) → [[Mullins Skin-Effect Post Processing]] -- **Metaprobe Collective Manifold Math vs Morphic DSP Design Comparison** (chatgpt_md, 11KB) → [[Morphic DSP]], [[Manifold Flow]], [[Manifold Viewer]] -- **Gowin DSP IP Manifold Shape Extraction** (chatgpt_md, 11KB) → [[Morphic DSP]], [[Manifold Flow]], [[Manifold Viewer]] -- **Soliton Map — N-Space Path Trace for Replayable Actions** (chatgpt_md, 11KB) → [[Soliton N-Space Path]] -- **WiFi, Bluetooth, and Ethernet Hardware Research** (chatgpt_md, 11KB) → [[Materials and Hardware Mining]] -- **Gowin DSP IP Math vs Morphic DSP Design Comparison** (chatgpt_md, 10KB) → [[Morphic DSP]] +- **Metaprobe Collective Manifold Math vs Morphic DSP Design Comparison** (chatgpt_md, 11KB) → [[Morphic DSP]], [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]] +- **Gowin DSP IP Manifold Shape Extraction** (chatgpt_md, 11KB) → [[Morphic DSP]], [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Kimi-Math Notation Extraction]] +- **Soliton Map — N-Space Path Trace for Replayable Actions** (chatgpt_md, 11KB) → [[Compression and Soliton Mining]], [[Conversation Mining Source Map]], [[H1 Path-Finding Projector]], [[Soliton N-Space Path]], [[Single-State Trace Spec]] +- **WiFi, Bluetooth, and Ethernet Hardware Research** (chatgpt_md, 11KB) → [[Compression and Soliton Mining]], [[Materials and Hardware Mining]], [[MoonRF ECP5 Hardware BFT Oracle]], [[Research Stack Home]], [[Research Stack Architecture]], [[Kimi-Tiny Tapeout Cost and Core]], [[Chat Log 415-1130 DIAT Hardware]], [[Hardware Probing Research Index]] +- **ISO Standards Learning Resource for Swarm Agents** (chatgpt_md, 11KB) → [[Swarm ENE Middleware]], [[Kimi-ISO Language Comparison]], [[Swarm Learning Resources Index]] +- **Single-State Trace Spec v0.1** (chatgpt_md, 11KB) → [[Concept Anchor Settlement State]], [[Photon-Chased Ferrite Trace Formation]], [[Topological State Machine]], [[Kimi-Spec 250 Equation Rigor]], [[Kimi-Carbon-11 Eta Prime State]], [[Kimi-N-State Models for Organic Systems]], [[Single-State Trace Spec]] +- **SSD PCIe Side Channel Probing** (chatgpt_md, 11KB) → [[Hardware Probing Research Index]] +- **HDMI Cleanroom Reverse Engineering Research** (chatgpt_md, 10KB) → [[HDMI Compute Fabric]], [[Research Stack Home]], [[Research Stack Architecture]], [[Hardware Probing Research Index]] +- **Gowin DSP IP Math vs Morphic DSP Design Comparison** (chatgpt_md, 10KB) → [[Morphic DSP]], [[Kimi-Math Queries]], [[Kimi-ISO Language Comparison]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]] - **[ARCHIVED - DEPRECATED TERMINOLOGY] Engram Codon Optical Decompressor** (chatgpt_md, 10KB) → [[Engram Decompressor]], [[Optical Codon Decoder]] +- **Keyboard, Mouse, and Monitor Device Research** (chatgpt_md, 10KB) → [[Compression and Soliton Mining]], [[Materials and Hardware Mining]], [[Research Stack Home]], [[Research Stack Architecture]], [[Hardware Probing Research Index]] +- **Meme Math That Pays Rent** (chatgpt_md, 10KB) → [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]], [[Meme Math That Pays Rent]] +- **Meme Math That Pays Rent** (chatgpt_md, 10KB) → [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]], [[Meme Math That Pays Rent]] +- **SSD Comprehensive Analysis** (chatgpt_md, 9KB) → [[Hutter Critical Analysis]], [[Hutter Tensor Field Analysis DAG]], [[Kimi-Cross Domain Math Analysis]] +- **RAM Addressing Scheme and Circuit Wiring Analysis** (chatgpt_md, 9KB) → [[Compression and Soliton Mining]], [[Hutter Critical Analysis]], [[Materials and Hardware Mining]], [[Menger Sponge Fractal Addressing]] - **Engram Codon Optical Decompressor** (chatgpt_md, 9KB) → [[Engram Decompressor]], [[Optical Codon Decoder]] -- **chat moe corpus specific compression 20260325** (research_article, 9KB) → [[Hutter Prize Compression]], [[Peptide MoE]] -- **Hardware Foreign Manifold Mapping Results** (chatgpt_md, 8KB) → [[Manifold Flow]], [[Manifold Viewer]] -- **chat gemini hutter zk containment 20260318** (research_article, 8KB) → [[Hutter Prize Compression]] -- **chat corpus analysis research stack 20260325** (research_article, 8KB) → [[Research Stack Home]], [[Research Stack Architecture]] -- **Connection Machine Hypercube → Engram Voxel Topology** (chatgpt_md, 7KB) → [[Engram Decompressor]], [[ASIC Topology]] +- **S3C Sparkle Integration Plan** (chatgpt_md, 9KB) → [[S3C MassPlus PIST Hyperbola]], [[ENe Cognitive Refactor Plan]], [[S3C Sparkle Integration Plan]] +- **Session Record: KDA-18 C20-C31 + BFT Judge Wiring** (chatgpt_md, 9KB) → [[Session Record KDA-18 BFT Judge]] +- **Biological Systems Learning Guide for Swarm** (chatgpt_md, 9KB) → [[Swarm ENE Middleware]], [[Kimi-N-State Models for Organic Systems]], [[Swarm Learning Resources Index]] +- **chat moe corpus specific compression 20260325** (research_article, 9KB) → [[Compression and Soliton Mining]], [[Full Chat Log Dumps]], [[Genomic Data Compression Anchor]], [[Hutter Prize Compression]], [[Yang-Mills Compression]], [[Peptide MoE]], [[Delta GCL Compression]], [[N-Folded MMR Gossip Compression]] +- **Realtek RTL8126 MMIO Security Analysis** (chatgpt_md, 8KB) → [[Hutter Critical Analysis]], [[Chat Log 414-1200 NII Core Security]] +- **Hardware Foreign Manifold Mapping Results** (chatgpt_md, 8KB) → [[Materials and Hardware Mining]], [[MoonRF ECP5 Hardware BFT Oracle]], [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Chat Log 415-1130 DIAT Hardware]], [[Hardware Probing Research Index]] +- **DisplayPort Cable Length and Travel Path Estimation** (chatgpt_md, 8KB) → [[Compression and Soliton Mining]], [[H1 Path-Finding Projector]], [[Materials and Hardware Mining]], [[Soliton N-Space Path]] +- **sovereign invariant analysis** (research_article, 8KB) → [[Hutter Critical Analysis]], [[Hutter Tensor Field Analysis DAG]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Protein Structures and Invariant Roots]] +- **chat gemini hutter zk containment 20260318** (research_article, 8KB) → [[Full Chat Log Dumps]], [[Hutter Critical Analysis]], [[Hutter Prize Compression]], [[Hutter Tensor Field Analysis DAG]], [[Hutter Prize ISA]] +- **chat corpus analysis research stack 20260325** (research_article, 8KB) → [[Full Chat Log Dumps]], [[Hutter Critical Analysis]], [[Research Stack Home]], [[Research Stack Architecture]], [[Hardware Probing Research Index]] +- **DisplayPort Cable Inference Research** (chatgpt_md, 8KB) → [[Research Stack Home]], [[Research Stack Architecture]], [[ChatGPT Evolution and Acoustic Inference]], [[Hardware Probing Research Index]] +- **Connection Machine Hypercube → Engram Voxel Topology** (chatgpt_md, 7KB) → [[Engram Decompressor]], [[Topological State Machine]], [[FiveD Torus Topology]], [[ASIC Topology]] - **sovereign knowledge genome** (chatgpt_md, 7KB) → [[Kimi-Topological Genome Tractability Pipeline]] -- **Janus Number Systems / Piet / Connectors Thread** (chatgpt_md, 7KB) → [[F-Number COUCH]] -- **S3C Lean Code Manual Review** (chatgpt_md, 6KB) → [[Lean Semantics Overview]] +- **Walkthrough: The Sovereign Stack (Integration Validated)** (chatgpt_md, 7KB) → [[Research Stack Home]], [[Research Stack Architecture]], [[S3C Sparkle Integration Plan]] +- **W3C Standards Learning Resource for Swarm Agents** (chatgpt_md, 7KB) → [[Swarm ENE Middleware]], [[Swarm Learning Resources Index]] +- **Janus Number Systems / Piet / Connectors Thread** (chatgpt_md, 7KB) → [[F-Number COUCH]], [[Mass Number Recursion Warning]], [[Mass Number Sidecar Rule]], [[Mass Number Theory]] +- **HDMI Cable Inference Research** (chatgpt_md, 7KB) → [[HDMI Compute Fabric]], [[Research Stack Home]], [[Research Stack Architecture]], [[ChatGPT Evolution and Acoustic Inference]], [[Hardware Probing Research Index]] +- **S3C Lean Code Manual Review** (chatgpt_md, 6KB) → [[S3C MassPlus PIST Hyperbola]], [[Lean Semantics Overview]], [[Genetic Code Pipeline]], [[Kimi-Lean Proof Completion]], [[Kimi-Multi-Expert OMTI Review]], [[Kimi-GitHub Repo Review]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]], [[S3C Sparkle Integration Plan]] - **Anisotropic Feature Genome** (chatgpt_md, 6KB) → [[Kimi-Topological Genome Tractability Pipeline]] -- **prior art semantic infrastructure talisman 20260401** (research_article, 5KB) → [[Semantic RG Flow]] -- **WaveProbe / Spoiler / Math Ingestion Thread** (chatgpt_md, 5KB) → [[Waveprobe]] -- **Hutter Archive Format Specification — v1** (chatgpt_md, 5KB) → [[Hutter Prize Compression]] -- **Chat Log Dump Manifest Summary** (chatgpt_md, 4KB) → [[Full Chat Log Dumps]] +- **Tang Nano 9K Design Comparison** (chatgpt_md, 6KB) → [[Kimi-ISO Language Comparison]] +- **observer admissible cavities theory** (research_article, 6KB) → [[Mass Number Theory]], [[Kimi-Ontological Manifold Theory Overview]], [[Kimi-Theory Cleanup via Review]] +- **prior art semantic infrastructure talisman 20260401** (research_article, 5KB) → [[Internal Semantic Search]], [[Reactive Semantic Perturbation]], [[Semantic Eigenvector Bundle]], [[Semantic Engine Binding Derivation]], [[Semantic Graph Mining]], [[Semantic Prime Refraction]], [[Semantic RG Flow]] +- **TSM-VDP Physics Audit & Unification Equation** (chatgpt_md, 5KB) → [[Master Equation Hole]], [[Equation Forest Index]], [[Kimi-N-Body Thermodynamic Equation]], [[Kimi-Spec 250 Equation Rigor]] +- **WaveProbe / Spoiler / Math Ingestion Thread** (chatgpt_md, 5KB) → [[Waveprobe]], [[Data Ingestion Pipeline]], [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]] +- **chat bigbang coulomb decompression 20260325** (research_article, 5KB) → [[Full Chat Log Dumps]] +- **Hutter Archive Format Specification — v1** (chatgpt_md, 5KB) → [[Hutter Critical Analysis]], [[Hutter Prize Compression]], [[Hutter Tensor Field Analysis DAG]], [[Hutter Prize ISA]] +- **Universal Power Interface (UPI) Spec** (chatgpt_md, 5KB) → [[Kimi-Universal Cross-Domain Math]], [[Single-State Trace Spec]] +- **SAE Feature Frequency Analysis — 2026-04-05** (chatgpt_md, 5KB) → [[Deep Mining Pass 2026-05-06]], [[Hutter Critical Analysis]], [[CMYK Frequency Core]] +- **Implementation Plan: Resonant Power Bridge (v5-N++)** (chatgpt_md, 4KB) → [[SLS Resonant Tubule Lattice]], [[TiddlyWiki ENE Bridge Plugin]], [[ENe Cognitive Refactor Plan]], [[S3C Sparkle Integration Plan]] +- **universal early warning signals** (unknown, 4KB) → [[Mass Number Recursion Warning]], [[Kimi-Universal Cross-Domain Math]] +- **chat operator fingerprint 20260325** (research_article, 4KB) → [[Full Chat Log Dumps]], [[Kimi-Algebraic Bracket Chat Room]], [[Chat Log 414-1043 Session]], [[Chat Log 414-1205 Math Chat Rooms]], [[Chat Log 414-1200 NII Core Security]], [[Chat Log 415-1130 DIAT Hardware]] +- **chat iso as neural filter 20260325** (research_article, 4KB) → [[Full Chat Log Dumps]], [[Monster Filter Family]], [[Kimi-ISO Language Comparison]] +- **dair agentic engineering wiki** (research_article, 4KB) → [[ENE Wiki Layer]] +- **phase_transport_full_preprint** (article, 4KB) → [[Full Chat Log Dumps]] +- **Chat Log Dump Manifest Summary** (chatgpt_md, 4KB) → [[Full Chat Log Dumps]], [[Chat Log 414-1043 Session]], [[Chat Log 414-1205 Math Chat Rooms]], [[Chat Log 414-1200 NII Core Security]], [[Chat Log 415-1130 DIAT Hardware]] - **120-Cell / Hachimoji / Twist Thread** (chatgpt_md, 3KB) → [[Hachimoji Pipeline]] -- **GeomTREE — The Semi-Jack Accountability Protocol (5-Minute Pitch)** (chatgpt_md, 3KB) → [[GeomTREE Semi-Jack Physical Witness]] -- **Fractal Fork Decompressor** (chatgpt_md, 3KB) → [[Engram Decompressor]], [[Menger Sponge Fractal Addressing]] -- **Collective Substrate ISA: Official v2.9 Specification** (chatgpt_md, 3KB) → [[Hutter Prize ISA]] -- **Adversarial MoE Audit: Resonant v5-N "Power Bridge"** (chatgpt_md, 2KB) → [[Peptide MoE]] -- **Longevity Audit: Avalanche Manifold vs. Wear & Tear** (chatgpt_md, 2KB) → [[Manifold Flow]], [[Manifold Viewer]] -- **Adversarial MoE Report: Resonant Power Bridge (v5-N++)** (chatgpt_md, 2KB) → [[Peptide MoE]] -- **Spec: The Unified Integration Controller (UN-C)** (chatgpt_md, 2KB) → [[Unified Hypersurface]] -- **chat gemini hutter physics blender 20260318** (research_article, 2KB) → [[Hutter Prize Compression]] -- **Spec: DAG Isomorphism (The Unified Scaling Law)** (chatgpt_md, 2KB) → [[Unified Hypersurface]] -- **Final Concept Audit: The Perpetual Passive Manifold (v5.0)** (chatgpt_md, 2KB) → [[Concept Vector 14]], [[Manifold Flow]], [[Manifold Viewer]] -- **Spec: The VRT Rust Engine (Topological State Unity)** (chatgpt_md, 2KB) → [[Topological State Machine]] -- **MoE Audit: Cheapest Full-Spectrum EM on a Chip** (chatgpt_md, 2KB) → [[Peptide MoE]] +- **Audit: Infrastructure Power Stage (The "Power Bridge" Platform)** (chatgpt_md, 3KB) → [[TiddlyWiki ENE Bridge Plugin]] +- **SOVEREIGN MATH MODEL DATABASE** (research_article, 3KB) → [[Kimi-Math Queries]], [[Kimi-θ-TaN Thermal Model]], [[Kimi-GraphML Manifold Model Improvement]], [[Kimi-Math Notation Extraction]], [[Kimi-Model Indexing and Equation Run]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]], [[Meme Math That Pays Rent]] +- **Energy-Aware Non-Linear Decompression** (chatgpt_md, 3KB) → [[Hybrid Abelian Non-Abelian Sandpile]] +- **Cognitive Thermo — Thermodynamic Path Exploration** (chatgpt_md, 3KB) → [[H1 Path-Finding Projector]], [[Soliton N-Space Path]], [[Thermodynamic Trinary Watchdog PLC]], [[ENe Cognitive Refactor Plan]], [[Kimi-N-Body Thermodynamic Equation]] +- **Physical Audit: Sovereign Cement (Adversarial Review)** (chatgpt_md, 3KB) → [[Kimi-Multi-Expert OMTI Review]], [[Kimi-GitHub Repo Review]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]] +- **Technical Specification: AAS Soliton Sorting** (chatgpt_md, 3KB) → [[Compression and Soliton Mining]], [[Soliton N-Space Path]] +- **Training mRNA Language Models Across 25 Species for $165** (chatgpt_md, 3KB) → [[Kimi-ISO Language Comparison]], [[Kimi-N-State Models for Organic Systems]] +- **Evidence of the pair-instability gap from black-hole masses - Nature** (chatgpt_md, 3KB) → [[Master Equation Hole]] +- **GeomTREE — The Semi-Jack Accountability Protocol (5-Minute Pitch)** (chatgpt_md, 3KB) → [[Address-First Search Protocol]], [[GeomTREE Semi-Jack Physical Witness]] +- **Sparse Autoencoders on Codon Language Models** (chatgpt_md, 3KB) → [[Optical Codon Decoder]], [[Kimi-ISO Language Comparison]] +- **Session Saga: Infohazard Containment Protocol (ICP)** (chatgpt_md, 3KB) → [[Address-First Search Protocol]] +- **Fractal Fork Decompressor** (chatgpt_md, 3KB) → [[Engram Decompressor]], [[Fractal Extendable Hair Field]], [[Fractal Hash Triplet]], [[Menger Sponge Fractal Addressing]] +- **behavioral merkle map** (research_article, 3KB) → [[Conversation Mining Source Map]], [[FAMM Fast Approximate Manifold Map]] +- **Collective Substrate ISA: Official v2.9 Specification** (chatgpt_md, 3KB) → [[ENE Substrate Mining]], [[Substrate FTS Query Surface]], [[Hutter Prize ISA]] +- **An ultra-high-resolution map of (dark) matter** (chatgpt_md, 3KB) → [[Conversation Mining Source Map]] +- **Adversarial MoE Audit: Resonant v5-N "Power Bridge"** (chatgpt_md, 2KB) → [[SLS Resonant Tubule Lattice]], [[TiddlyWiki ENE Bridge Plugin]], [[Peptide MoE]] +- **Spec: N-Space Resilience Strain Gauge** (chatgpt_md, 2KB) → [[Soliton N-Space Path]], [[Single-State Trace Spec]] +- **Technical Specification: AAS-Enhanced VM Substrate** (chatgpt_md, 2KB) → [[ENE Substrate Mining]], [[Substrate FTS Query Surface]] +- **Spec: The Sovereign Lattice (N-Space Structural Synthesis)** (chatgpt_md, 2KB) → [[SLS Resonant Tubule Lattice]], [[Soliton N-Space Path]], [[Structural eFuse Surface]], [[Single-State Trace Spec]] +- **Technical Specification: AAS-Enhanced SHA256 Encoding** (chatgpt_md, 2KB) → [[PIST Shell Encoding]], [[Golden Angle Encoding]] +- **Spec: N-Space Structural Synthesis (Topological 3D)** (chatgpt_md, 2KB) → [[Soliton N-Space Path]], [[Structural eFuse Surface]], [[Topological State Machine]], [[Single-State Trace Spec]] +- **Longevity Audit: Avalanche Manifold vs. Wear & Tear** (chatgpt_md, 2KB) → [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]] +- **Adversarial MoE Report: Resonant Power Bridge (v5-N++)** (chatgpt_md, 2KB) → [[SLS Resonant Tubule Lattice]], [[TiddlyWiki ENE Bridge Plugin]], [[Peptide MoE]] +- **Deep Dive: The Metanarrative Harness (v5-N++)** (chatgpt_md, 2KB) → [[Deep Mining Pass 2026-05-06]] +- **chat iso precompression 20260325** (research_article, 2KB) → [[Full Chat Log Dumps]], [[Kimi-Algebraic Bracket Chat Room]], [[Kimi-ISO Language Comparison]], [[Chat Log 414-1043 Session]], [[Chat Log 414-1205 Math Chat Rooms]], [[Chat Log 414-1200 NII Core Security]], [[Chat Log 415-1130 DIAT Hardware]] +- **Chaos-First Test Rig Design (Resonant Power Bridge)** (chatgpt_md, 2KB) → [[Address-First Search Protocol]], [[SLS Resonant Tubule Lattice]], [[TiddlyWiki ENE Bridge Plugin]] +- **Spec: Sovereign Cement (DAG-Enhanced 3DCP)** (chatgpt_md, 2KB) → [[Hutter Tensor Field Analysis DAG]], [[Single-State Trace Spec]] +- **Spec: The Unified Integration Controller (UN-C)** (chatgpt_md, 2KB) → [[Unified Hypersurface]], [[S3C Sparkle Integration Plan]], [[Single-State Trace Spec]] +- **Wormhole Mechanism Specification (Resonant Power Bridge)** (chatgpt_md, 2KB) → [[SLS Resonant Tubule Lattice]], [[TiddlyWiki ENE Bridge Plugin]] +- **tunnel Mechanism Specification (Resonant Power Bridge)** (chatgpt_md, 2KB) → [[SLS Resonant Tubule Lattice]], [[TiddlyWiki ENE Bridge Plugin]] +- **chat gemini hutter physics blender 20260318** (research_article, 2KB) → [[Full Chat Log Dumps]], [[Hutter Critical Analysis]], [[Hutter Prize Compression]], [[Hutter Tensor Field Analysis DAG]], [[Hutter Prize ISA]] +- **Competitive Analysis: Resonant v5-G vs. Modern Silicon** (chatgpt_md, 2KB) → [[Hutter Critical Analysis]], [[SLS Resonant Tubule Lattice]] +- **Sovereign Stack: Overview & Immediate Integration** (chatgpt_md, 2KB) → [[Research Stack Home]], [[Lean Semantics Overview]], [[Research Stack Architecture]], [[S3C Sparkle Integration Plan]] +- **Spec: DAG Isomorphism (The Unified Scaling Law)** (chatgpt_md, 2KB) → [[Hutter Tensor Field Analysis DAG]], [[Unified Hypersurface]], [[Single-State Trace Spec]] +- **Superluminal Correlations in Ensembles of Optical Phase Singularities** (chatgpt_md, 2KB) → [[Optical Codon Decoder]] +- **Final Concept Audit: The Perpetual Passive Manifold (v5.0)** (chatgpt_md, 2KB) → [[Concept Anchor Settlement State]], [[Concept Vector 14]], [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Kimi-PBACS Final Version]] +- **Spec: The VRT Rust Engine (Topological State Unity)** (chatgpt_md, 2KB) → [[Concept Anchor Settlement State]], [[Semantic Engine Binding Derivation]], [[Topological State Machine]], [[Single-State Trace Spec]] +- **MoE Audit: Cheapest Full-Spectrum EM on a Chip** (chatgpt_md, 2KB) → [[Full Chat Log Dumps]], [[Peptide MoE]] +- **ms myelin glucose signaling 2026 05 04** (research_article, 2KB) → [[Deep Mining Pass 2026-05-06]] +- **Spec: The Sovereign Tower (N-Space Structural Prototype)** (chatgpt_md, 2KB) → [[Soliton N-Space Path]], [[Structural eFuse Surface]], [[Single-State Trace Spec]] +- **Superluminal Correlations in Ensembles of Optical Phase Singularities** (chatgpt_md, 2KB) → [[Optical Codon Decoder]] - **Audit: VRT Software Resilience (MoE & Wolfram)** (chatgpt_md, 2KB) → [[Peptide MoE]] -- **PCBWay Trace Routing Guide: TSM-VDP Wire-Centric Logic** (chatgpt_md, 2KB) → [[SLUQ Routing]] -- **Spec: Sovereign Jenga (Discrete N-Space Manifold)** (chatgpt_md, 2KB) → [[Manifold Flow]], [[Manifold Viewer]] -- **Audit: Topological State Unity (The Integration Capstone)** (chatgpt_md, 2KB) → [[Topological State Machine]] -- **Spec: Resonant Topological State Unity Virtual Radio Telescope (VRT)** (chatgpt_md, 2KB) → [[Topological State Machine]] -- **CANONICAL MATH MODELS** (research_article, 2KB) → [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]] -- **Specification: Graph-Based State-Propagation VM (v1.1)** (chatgpt_md, 2KB) → [[Topological State Machine]] -- **TSM-VDP CPU & Hardware Architecture Review** (chatgpt_md, 1KB) → [[Research Stack Architecture]], [[NIICore Architecture]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]] +- **Proof & Directive: Sovereign Jenga Manufacturing** (chatgpt_md, 2KB) → [[Kimi-Lean Proof Completion]] +- **PTOS Security Mapping (Hardware Hardening)** (chatgpt_md, 2KB) → [[Materials and Hardware Mining]], [[MoonRF ECP5 Hardware BFT Oracle]], [[Chat Log 414-1200 NII Core Security]], [[Chat Log 415-1130 DIAT Hardware]], [[Hardware Probing Research Index]] +- **Bridge Protocol Specification: Bitcoin L2/L3 Integration** (chatgpt_md, 2KB) → [[Address-First Search Protocol]], [[TiddlyWiki ENE Bridge Plugin]], [[S3C Sparkle Integration Plan]] +- **PCBWay Trace Routing Guide: TSM-VDP Wire-Centric Logic** (chatgpt_md, 2KB) → [[SLUQ Routing]], [[Single-State Trace Spec]] +- **Metanarrative Goal Spec: The Target Function** (chatgpt_md, 2KB) → [[Single-State Trace Spec]] +- **Long-Term Roadmap: Resonant Power Bridge** (chatgpt_md, 2KB) → [[SLS Resonant Tubule Lattice]], [[TiddlyWiki ENE Bridge Plugin]] +- **Spec: Sovereign Jenga (Discrete N-Space Manifold)** (chatgpt_md, 2KB) → [[Soliton N-Space Path]], [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Single-State Trace Spec]] +- **Geometry from quantum temporal correlations** (chatgpt_md, 2KB) → [[Kimi-Unsolved Geometry Problems]], [[Kimi-Protein Geometry and N-Fold]] +- **Spec: 20 THz Quasicrystalline NEMS Array (MOCVD)** (chatgpt_md, 2KB) → [[Single-State Trace Spec]] +- **chat substrate design 20260325** (research_article, 2KB) → [[ENE Substrate Mining]], [[Full Chat Log Dumps]], [[Substrate FTS Query Surface]], [[Kimi-Algebraic Bracket Chat Room]], [[Chat Log 414-1043 Session]], [[Chat Log 414-1205 Math Chat Rooms]], [[Chat Log 414-1200 NII Core Security]], [[Chat Log 415-1130 DIAT Hardware]] +- **Audit: Topological State Unity (The Integration Capstone)** (chatgpt_md, 2KB) → [[Concept Anchor Settlement State]], [[Topological State Machine]], [[S3C Sparkle Integration Plan]], [[Single-State Trace Spec]] +- **Report: VRT Software Stability & Resilience** (chatgpt_md, 2KB) → [[Kimi-Emergent Stability Power Networks]] +- **Audit: Power Miser Optimization (v5-J)** (chatgpt_md, 2KB) → [[Kimi-Emergent Stability Power Networks]] +- **Spec: Resonant Topological State Unity Virtual Radio Telescope (VRT)** (chatgpt_md, 2KB) → [[Concept Anchor Settlement State]], [[SLS Resonant Tubule Lattice]], [[Topological State Machine]], [[Single-State Trace Spec]] +- **Model: Atmospheric Fracking Cycle (Londetite & Regolith)** (chatgpt_md, 2KB) → [[Kimi-θ-TaN Thermal Model]], [[Kimi-Model Indexing and Equation Run]] +- **CANONICAL MATH MODELS** (research_article, 2KB) → [[Kimi-Math Queries]], [[Kimi-Math Notation Extraction]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-N-State Models for Organic Systems]], [[Kimi-Universal Cross-Domain Math]], [[Kimi-Attention-Driven Canonical Action]], [[Chat Log 414-1205 Math Chat Rooms]], [[Meme Math That Pays Rent]] +- **Geometry from quantum temporal correlations** (chatgpt_md, 2KB) → [[Kimi-Unsolved Geometry Problems]], [[Kimi-Protein Geometry and N-Fold]] +- **Specification: Graph-Based State-Propagation VM (v1.1)** (chatgpt_md, 2KB) → [[Concept Anchor Settlement State]], [[Graph-Evolving RAG]], [[Semantic Graph Mining]], [[Topological State Machine]], [[Single-State Trace Spec]] +- **BOM: Resonant Power Bridge Platform (v5-N++)** (chatgpt_md, 1KB) → [[SLS Resonant Tubule Lattice]], [[TiddlyWiki ENE Bridge Plugin]] +- **TSM-VDP CPU & Hardware Architecture Review** (chatgpt_md, 1KB) → [[Materials and Hardware Mining]], [[MoonRF ECP5 Hardware BFT Oracle]], [[Research Stack Architecture]], [[NIICore Architecture]], [[Kimi-Multi-Expert OMTI Review]], [[Kimi-GitHub Repo Review]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]], [[Chat Log 415-1130 DIAT Hardware]], [[Hardware Probing Research Index]] +- **Spec: Londetite Energy Storage (Solid-State Fuel)** (chatgpt_md, 1KB) → [[Concept Anchor Settlement State]], [[Topological State Machine]], [[Single-State Trace Spec]] +- **Tech Note: Projective Interlock (The Jenga Proof)** (chatgpt_md, 1KB) → [[Kimi-Lean Proof Completion]] +- **Pre-SME Adversarial Audit: Persona Gene Drive Pass** (chatgpt_md, 1KB) → [[Deep Mining Pass 2026-05-06]] +- **Graph-Based SQL Substrate: Technical Specification** (chatgpt_md, 1KB) → [[ENE Substrate Mining]], [[Graph-Evolving RAG]], [[Semantic Graph Mining]], [[Substrate FTS Query Surface]] - **TSM-VDP v5: Virtual Verilog Architecture** (chatgpt_md, 1KB) → [[Research Stack Architecture]], [[NIICore Architecture]] -- **Audit: High-Density Manifold Computation (v5-G)** (chatgpt_md, 1KB) → [[Manifold Flow]], [[Manifold Viewer]] -- **Virtual Radio Network & Custom Substrate Review** (chatgpt_md, 1KB) → [[Kimi-review stablity]], [[Kimi-Framework Re-Review]] -- **Tech Note: Symbolic Calibration (The Math/Metaphor Bridge)** (chatgpt_md, 1KB) → [[Organoid Lambda Calibration]] -- **Audit: Resonant v5-H "Hardened" Manifold** (chatgpt_md, 1KB) → [[Manifold Flow]], [[Manifold Viewer]] -- **Audit: Sovereign Lattice Resilience (MoE)** (chatgpt_md, 1KB) → [[Peptide MoE]] -- **Synthesis: Passive Logic Manifold (R-L-C)** (chatgpt_md, 1KB) → [[Manifold Flow]], [[Manifold Viewer]] +- **Audit: High-Density Manifold Computation (v5-G)** (chatgpt_md, 1KB) → [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]] +- **Wolfram Alpha Analytical Input Sheet (AAS-Integration)** (chatgpt_md, 1KB) → [[S3C Sparkle Integration Plan]] +- **Virtual Radio Network & Custom Substrate Review** (chatgpt_md, 1KB) → [[ENE Substrate Mining]], [[Substrate FTS Query Surface]], [[Kimi-Multi-Expert OMTI Review]], [[Kimi-GitHub Repo Review]], [[Kimi-Theory Cleanup via Review]], [[Kimi-review stablity]], [[Kimi-Framework Re-Review]], [[Kimi-Review of Your Formula]] +- **TSM-VDP: System Reliability & Stability Audit** (chatgpt_md, 1KB) → [[Kimi-Emergent Stability Power Networks]] +- **Sovereign Math Model Database: Instance Report** (chatgpt_md, 1KB) → [[Kimi-Math Queries]], [[Kimi-θ-TaN Thermal Model]], [[Kimi-Math Notation Extraction]], [[Kimi-Model Indexing and Equation Run]], [[Kimi-Cross Domain Math Analysis]], [[Kimi-Universal Cross-Domain Math]], [[Chat Log 414-1205 Math Chat Rooms]] +- **Audit: Thermodynamic Power Computation (Power-as-Logic)** (chatgpt_md, 1KB) → [[Thermodynamic Trinary Watchdog PLC]], [[Kimi-N-Body Thermodynamic Equation]] +- **Tech Note: Mechanical Merkle Tree (Proof-of-State)** (chatgpt_md, 1KB) → [[Concept Anchor Settlement State]], [[Tree Fiddy Monster Assignment]], [[Topological State Machine]], [[Kimi-Lean Proof Completion]], [[Single-State Trace Spec]] +- **PCB Design Specification: Graph VM Logic Substrate** (chatgpt_md, 1KB) → [[ENE Substrate Mining]], [[Graph-Evolving RAG]], [[Semantic Graph Mining]], [[Substrate FTS Query Surface]] +- **Tech Note: Symbolic Calibration (The Math/Metaphor Bridge)** (chatgpt_md, 1KB) → [[Organoid Lambda Calibration]], [[TiddlyWiki ENE Bridge Plugin]] +- **Audit: Quantum Evolution & Self-Organization (v5-K)** (chatgpt_md, 1KB) → [[ChatGPT Evolution and Acoustic Inference]] +- **Audit: Sovereign Jenga Efficiency & Stability** (chatgpt_md, 1KB) → [[Kimi-Emergent Stability Power Networks]] +- **Cognitive Load + Trinary Clock Integration** (chatgpt_md, 1KB) → [[Thermodynamic Trinary Watchdog PLC]], [[ENe Cognitive Refactor Plan]], [[S3C Sparkle Integration Plan]] +- **Audit: Resonant v5-H "Hardened" Manifold** (chatgpt_md, 1KB) → [[SLS Resonant Tubule Lattice]], [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Kimi-Ontological Manifold Theory Overview]], [[Kimi-GraphML Manifold Model Improvement]] +- **Audit: Holographic Fractal Connectome (Budget Edition)** (chatgpt_md, 1KB) → [[Fractal Extendable Hair Field]], [[Fractal Hash Triplet]], [[Menger Sponge Fractal Addressing]] +- **Technical Specification: Verifiable Data Provenance (VDP)** (chatgpt_md, 1KB) → [[Genomic Data Compression Anchor]], [[Data Ingestion Pipeline]] +- **Audit: Sovereign Lattice Resilience (MoE)** (chatgpt_md, 1KB) → [[SLS Resonant Tubule Lattice]], [[Peptide MoE]] +- **Synthesis: Passive Logic Manifold (R-L-C)** (chatgpt_md, 1KB) → [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]], [[Kimi-Ontological Manifold Theory Overview]], [[Kimi-GraphML Manifold Model Improvement]] +- **Audit: Passive R-L-C-P Field Computation (v5.0 Final)** (chatgpt_md, 1KB) → [[Fractal Extendable Hair Field]], [[Meta-Autotype Contingent Field]], [[Kimi-PBACS Final Version]] +- **research ingestion index** (research_article, 1KB) → [[Research Stack Home]], [[Data Ingestion Pipeline]], [[Research Stack Architecture]], [[Equation Forest Index]], [[Swarm Learning Resources Index]], [[Hardware Probing Research Index]] +- **Retrieval Comparison: NoSQL vs Collective Substrate** (chatgpt_md, 1KB) → [[ENE Substrate Mining]], [[Substrate FTS Query Surface]], [[Kimi-ISO Language Comparison]] - **bodega map** (research_article, 1KB) → [[Conversation Mining Source Map]], [[FAMM Fast Approximate Manifold Map]] -- **Specification: Resonant Stack v5 Unified Field** (chatgpt_md, 1KB) → [[Unified Hypersurface]] -- **Audit: Silent Manifold Phase-Filter (v5-G)** (chatgpt_md, 1KB) → [[Manifold Flow]], [[Manifold Viewer]] -- **Audit: v5-G "Virtual ASIC" (Final Hardware Verification)** (chatgpt_md, 1KB) → [[ASIC Topology]] -- **Plan: Categorize and Find Invariant Roots** (chatgpt_md, 1KB) → [[Kimi-Protein Structures and Invariant Roots]] -- **Chat Log Dumps** (chatgpt_md, 1KB) → [[Full Chat Log Dumps]] -- **research ingestion index** (research_article, 0KB) → [[Data Ingestion Pipeline]] +- **Downloads Batch 2026-04-02** (chatgpt_md, 1KB) → [[Deep Mining Pass 2026-05-06]] +- **Audit: Resonant v5-K "Resonant Echo"** (chatgpt_md, 1KB) → [[SLS Resonant Tubule Lattice]] +- **Spec: Qutrit State-Space (Sovereign Signal Tier)** (chatgpt_md, 1KB) → [[Concept Anchor Settlement State]], [[Soliton N-Space Path]], [[Topological State Machine]], [[Single-State Trace Spec]] +- **Deployment Guide: Resonant v5-B Village Power Stabilizer** (chatgpt_md, 1KB) → [[SLS Resonant Tubule Lattice]] +- **Audit: Memistor-Adaptive Logic (The Widrow Approach)** (chatgpt_md, 1KB) → [[AMMR Adaptive Meshless Methods]] +- **Specification: Resonant Stack v5 Unified Field** (chatgpt_md, 1KB) → [[Fractal Extendable Hair Field]], [[Meta-Autotype Contingent Field]], [[Research Stack Home]], [[SLS Resonant Tubule Lattice]], [[Unified Hypersurface]], [[Research Stack Architecture]] +- **Audit: Silent Manifold Phase-Filter (v5-G)** (chatgpt_md, 1KB) → [[Monster Filter Family]], [[Pathological Manifold Torus]], [[Manifold Flow]], [[FAMM Fast Approximate Manifold Map]], [[AVMR Adaptive Vector Manifold Representation]], [[Manifold Viewer]] +- **Audit: ISO-Standard Grid-Mesh (v5-F)** (chatgpt_md, 1KB) → [[Kimi-ISO Language Comparison]] +- **Audit: Topological Memistor Emulation (The Filament Approach)** (chatgpt_md, 1KB) → [[Topological State Machine]] +- **Audit: v5-G "Virtual ASIC" (Final Hardware Verification)** (chatgpt_md, 1KB) → [[Materials and Hardware Mining]], [[MoonRF ECP5 Hardware BFT Oracle]], [[SDR Void Hash Verification]], [[Virtual Display Blitter Compute Surface]], [[ASIC Topology]], [[Kimi-PBACS Final Version]], [[Chat Log 415-1130 DIAT Hardware]], [[Hardware Probing Research Index]] +- **Plan: Categorize and Find Invariant Roots** (chatgpt_md, 1KB) → [[Compression and Soliton Mining]], [[Materials and Hardware Mining]], [[ENe Cognitive Refactor Plan]], [[Kimi-Protein Structures and Invariant Roots]], [[S3C Sparkle Integration Plan]] +- **The House, The Player, and Zero** (chatgpt_md, 1KB) → [[Compression and Soliton Mining]], [[Materials and Hardware Mining]] +- **Chat Log Dumps** (chatgpt_md, 1KB) → [[Full Chat Log Dumps]], [[Kimi-Algebraic Bracket Chat Room]], [[Chat Log 414-1043 Session]], [[Chat Log 414-1205 Math Chat Rooms]], [[Chat Log 414-1200 NII Core Security]], [[Chat Log 415-1130 DIAT Hardware]] +- **session sovereign stack rev a boot 20260401** (research_article, 0KB) → [[Research Stack Home]], [[Research Stack Architecture]] ## Uncovered Sources (no tiddlers yet) -- SOVEREIGN MATH MODEL DATABASE V2 (research_article, 107613KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/SOVEREIGN_MATH_MODEL_DATABASE_V2.json` - HY_World_2_0 (article, 33418KB) — `/home/allaun/Documents/ingest/HY_World_2_0.pdf` - Agentic_Design_Patterns (article, 19626KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/Agentic_Design_Patterns.pdf` - s41378-025-00875-w (article, 2616KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/s41378-025-00875-w.pdf` - Yu 2025 ApJ 995 205 (unknown, 2063KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/Yu_2025_ApJ_995_205.epub` - rsif.2022.0562 (article, 1258KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/rsif.2022.0562.pdf` -- possible duplicate chatgpt 414 1212 (chatgpt_md, 521KB) — `/home/allaun/Documents/ingest/possible_duplicate_chatgpt_414_1212.md` -- kimik2.5 possible dupe 220pm 41426 (chatgpt_md, 443KB) — `/home/allaun/Documents/ingest/kimik2.5_possible_dupe_220pm_41426.md` -- chagpt 414 1043 (chatgpt_md, 415KB) — `/home/allaun/Documents/ingest/chagpt-414-1043.md` -- chagpt 414 1202 (chatgpt_md, 415KB) — `/home/allaun/Documents/ingest/chagpt-414-1202.md` -- chatgpt conversation 415 1130am (chatgpt_md, 388KB) — `/home/allaun/Documents/ingest/chatgpt_conversation_415_1130am.md` -- chatgpt ingest1 (chatgpt_md, 388KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/chatgpt_ingest1.md` -- possible duplicate pbacs chatgpt 414 1218 (chatgpt_md, 315KB) — `/home/allaun/Documents/ingest/possible_duplicate_pbacs_chatgpt_414_1218.md` -- chagpt 414 1205 (chatgpt_md, 310KB) — `/home/allaun/Documents/ingest/chagpt-414-1205.md` -- possible duplicate chatgpt 414 1210 (chatgpt_md, 310KB) — `/home/allaun/Documents/ingest/possible_duplicate_chatgpt_414_1210.md` -- How_Malicious_AI_Swarms_Can_Threaten_Democracy%20%281%29 (article, 248KB) — `/home/allaun/Documents/ingest/How_Malicious_AI_Swarms_Can_Threaten_Democracy%20%281%29.pdf` -- ChatGPT Evolution and Acoustic Inference (research_article, 243KB) — `/home/allaun/Documents/ingest/ChatGPT-Evolution_and_Acoustic_Inference.json` -- chagpt 414 1200 (chatgpt_md, 238KB) — `/home/allaun/Documents/ingest/chagpt-414-1200.md` -- post 196596937 20260506T000632Z (research_article, 228KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/babbage-to-babcock/substack_bundle/substack_backups/post_196596937_20260506T000632Z.json` -- possible duplicate chatgpt 414 1214 (chatgpt_md, 199KB) — `/home/allaun/Documents/ingest/possible_duplicate_chatgpt_414_1214.md` -- post 196596937 20260506T000639Z (research_article, 198KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/babbage-to-babcock/substack_bundle/substack_backups/post_196596937_20260506T000639Z.json` - manifest 20260318T231339Z (research_article, 172KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/vault/manifest_20260318T231339Z.json` -- possible duplicate chatgpt 414 1215 (chatgpt_md, 131KB) — `/home/allaun/Documents/ingest/possible_duplicate_chatgpt_414_1215.md` - attestestion file (chatgpt_md, 121KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/attestestion_file.md` -- ChatGPT TopologicalStateMachine Debugging (research_article, 74KB) — `/home/allaun/Documents/ingest/ChatGPT-TopologicalStateMachine_Debugging.json` -- chagpt 414 1043 attestation index (research_article, 67KB) — `/home/allaun/Documents/ingest/chagpt-414-1043_attestation_index.json` - crown analogy (chatgpt_md, 58KB) — `/home/allaun/Documents/ingest/extraction required/crown analogy.md` - Autocatalysis Before Enzymes (chatgpt_md, 41KB) — `/home/allaun/Documents/ingest/Autocatalysis Before Enzymes.md` -- freakingpaste (chatgpt_md, 41KB) — `/home/allaun/Documents/ingest/freakingpaste.md` -- Comprehensive Physics and Engineering Learning Guide for Swarm (chatgpt_md, 38KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/comprehensive_physics_engineering_guide.md` - OMT paper (unknown, 36KB) — `/home/allaun/Documents/ingest/extraction required/OMT_paper.docx` -- From Babbage to Babcock (chatgpt_md, 33KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/babbage-to-babcock/substack_bundle/post.md` -- From Babbage to Babcock (chatgpt_md, 33KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/babbage-to-babcock/article.md` - manifest 20260318T231057Z (research_article, 28KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/vault/manifest_20260318T231057Z.json` -- Comprehensive Technical Standards Learning Resource for Swarm Agents (chatgpt_md, 27KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/comprehensive_technical_standards_resource.md` - experiment (unknown, 26KB) — `/home/allaun/Documents/ingest/extraction required/experiment.py` - experiment (1) (unknown, 26KB) — `/home/allaun/Documents/ingest/extraction required/experiment (1).py` - simulate omt (unknown, 24KB) — `/home/allaun/Documents/ingest/extraction required/simulate_omt.py` - simulate omt (1) (unknown, 24KB) — `/home/allaun/Documents/ingest/extraction required/simulate_omt (1).py` -- Digital Platforms Learning Resource for Swarm Agents (chatgpt_md, 24KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/digital_platforms_learning_resource.md` -- Internet Protocols Learning Resource for Swarm Agents (chatgpt_md, 23KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/internet_protocols_learning_resource.md` - simulate qubo (unknown, 20KB) — `/home/allaun/Documents/ingest/extraction required/simulate_qubo.py` - simulate qubo (1) (unknown, 20KB) — `/home/allaun/Documents/ingest/extraction required/simulate_qubo (1).py` - simulate qubo (2) (unknown, 20KB) — `/home/allaun/Documents/ingest/extraction required/simulate_qubo (2).py` -- cmyk adapter experiment (unknown, 19KB) — `/home/allaun/Documents/ingest/extraction required/cmyk_adapter_experiment.py` -- cmyk adapter experiment (1) (unknown, 19KB) — `/home/allaun/Documents/ingest/extraction required/cmyk_adapter_experiment (1).py` - simulate (unknown, 18KB) — `/home/allaun/Documents/ingest/extraction required/simulate.py` - simulate (1) (unknown, 18KB) — `/home/allaun/Documents/ingest/extraction required/simulate (1).py` -- Mathematical Basis of the Meta-Ontological Inversion Machine (chatgpt_md, 17KB) — `/home/allaun/Documents/ingest/moim/docs/architecture/MOIM_MathematicalBasis.md` - TotalSignal AcceleratingLoop (chatgpt_md, 16KB) — `/home/allaun/Documents/ingest/moim/formal/lean/core/TotalSignal_AcceleratingLoop.txt` - nuvmap compress (unknown, 16KB) — `/home/allaun/Documents/ingest/extraction required/nuvmap_compress.py` - nuvmap compress (1) (unknown, 16KB) — `/home/allaun/Documents/ingest/extraction required/nuvmap_compress (1).py` -- MOIM PROJECT INDEX v4.0 (chatgpt_md, 16KB) — `/home/allaun/Documents/ingest/moim/PROJECT_INDEX.md` - MOIM System Manifest v3.0 (chatgpt_md, 16KB) — `/home/allaun/Documents/ingest/moim/manifest/MOIM_SYSTEM_MANIFEST_v3.md` - nuvmap freq experiment (unknown, 15KB) — `/home/allaun/Documents/ingest/extraction required/nuvmap_freq_experiment.py` - nuvmap freq experiment (1) (unknown, 15KB) — `/home/allaun/Documents/ingest/extraction required/nuvmap_freq_experiment (1).py` - nuvmap freq experiment (2) (unknown, 15KB) — `/home/allaun/Documents/ingest/extraction required/nuvmap_freq_experiment (2).py` - nuvmap freq experiment (3) (unknown, 15KB) — `/home/allaun/Documents/ingest/extraction required/nuvmap_freq_experiment (3).py` -- Finer Hardware Probing Methods - Research Summary (chatgpt_md, 15KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/finer_probing_methods_research.md` - CMYKFrequencyCore (unknown, 14KB) — `/home/allaun/Documents/ingest/extraction required/CMYKFrequencyCore` -- Mesa Drivers for AMD GPU - HDMI/DisplayPort Support Research (chatgpt_md, 14KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/mesa_driver_hdmi_displayport_research.md` -- AMMR AVMR TruthTest test vectors (research_article, 14KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/REVISED_EQUATIONS/AMMR_AVMR_TruthTest_test_vectors.json` - SovereignMathModel test vectors (research_article, 14KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/REVISED_EQUATIONS/SovereignMathModel_test_vectors.json` -- Bridge Model Module Guide (chatgpt_md, 13KB) — `/home/allaun/Documents/ingest/BridgeModel_Module_Guide.md` -- Bridge Model Module Guide (chatgpt_md, 13KB) — `/home/allaun/Documents/ingest/Chatgpt_415508PM_latest_model_exports_bundle/BridgeModel_Module_Guide.md` - 四力几何推导 (kimi_json, 13KB) — `/home/allaun/Documents/ingest/Kimi-四力几何推导.json` -- GPU Optimization Guide for Swarm Learning (chatgpt_md, 13KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/gpu_optimization_guide.md` - MOIM System Manifest v2.0 (chatgpt_md, 12KB) — `/home/allaun/Documents/ingest/moim/manifest/MOIM_SYSTEM_MANIFEST_v2.md` - Makefile (unknown, 11KB) — `/home/allaun/Documents/ingest/moim/build/Makefile` -- ISO Standards Learning Resource for Swarm Agents (chatgpt_md, 11KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/iso_standards_learning_resource.md` -- Single-State Trace Spec v0.1 (chatgpt_md, 11KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hutter/single_state_trace_spec.md` -- SSD PCIe Side Channel Probing (chatgpt_md, 11KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/ssd_pcie_side_channel_probing.md` - omt pruning experiment (unknown, 10KB) — `/home/allaun/Documents/ingest/extraction required/omt_pruning_experiment.py` - Tasks (chatgpt_md, 10KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/task.md` -- HDMI Cleanroom Reverse Engineering Research (chatgpt_md, 10KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hdmi_cleanroom_reverse_engineering_research.md` - The Ending (chatgpt_md, 10KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hutter/THE_ENDING.md` -- Keyboard, Mouse, and Monitor Device Research (chatgpt_md, 10KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/keyboard_mouse_monitor_research.md` -- Meme Math That Pays Rent (chatgpt_md, 10KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/meme-math-that-pays-rent/article.md` -- Meme Math That Pays Rent (chatgpt_md, 10KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/meme-math-that-pays-rent/substack_bundle/post.md` -- SSD Comprehensive Analysis (chatgpt_md, 9KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/ssd_comprehensive_analysis.md` -- RAM Addressing Scheme and Circuit Wiring Analysis (chatgpt_md, 9KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/ram_addressing_circuit_wiring_analysis.md` -- S3C Sparkle Integration Plan (chatgpt_md, 9KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/s3c_sparkle_integration_plan.md` - behavioral taxonomy merkle (research_article, 9KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/REVISED_EQUATIONS/behavioral_taxonomy_merkle.json` -- Session Record: KDA-18 C20-C31 + BFT Judge Wiring (chatgpt_md, 9KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/session-kda18-c20-c31-bft-wiring-20260405.md` -- Biological Systems Learning Guide for Swarm (chatgpt_md, 9KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/biological_systems_guide.md` -- Realtek RTL8126 MMIO Security Analysis (chatgpt_md, 8KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/realtek_rtl8126_mmio_security_analysis.md` - behavioral taxonomy merkle (chatgpt_md, 8KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/REVISED_EQUATIONS/behavioral_taxonomy_merkle.txt` -- DisplayPort Cable Length and Travel Path Estimation (chatgpt_md, 8KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/displayport_cable_length_timing_estimation.md` -- sovereign invariant analysis (research_article, 8KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/REVISED_EQUATIONS/sovereign_invariant_analysis.json` -- DisplayPort Cable Inference Research (chatgpt_md, 8KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/displayport_cable_inference_research.md` - SAE Feature Scraper — Design Record (chatgpt_md, 7KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/design-sae-feature-scraper-20260405.md` -- Walkthrough: The Sovereign Stack (Integration Validated) (chatgpt_md, 7KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/walkthrough.md` -- W3C Standards Learning Resource for Swarm Agents (chatgpt_md, 7KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/w3c_standards_learning_resource.md` - The Approach — Feature-Byte Mirror v3 (chatgpt_md, 7KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hutter/APPROACH.md` -- HDMI Cable Inference Research (chatgpt_md, 7KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hdmi_cable_inference_research.md` -- Tang Nano 9K Design Comparison (chatgpt_md, 6KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/tang_nano_9k_design_comparison.md` -- TSM-VDP Physics Audit & Unification Equation (chatgpt_md, 5KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/physics_audit.md` -- chat bigbang coulomb decompression 20260325 (research_article, 5KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/chat-bigbang-coulomb-decompression-20260325.json` -- Universal Power Interface (UPI) Spec (chatgpt_md, 5KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/universal_power_interface.md` -- SAE Feature Frequency Analysis — 2026-04-05 (chatgpt_md, 5KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/chat-sae-feature-frequency-analysis-20260405.md` - build manifest (unknown, 5KB) — `/home/allaun/Documents/Research Stack/6-Documentation/chat-log-dumps/build_manifest.py` -- Implementation Plan: Resonant Power Bridge (v5-N++) (chatgpt_md, 4KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/implementation_plan.md` -- universal early warning signals (unknown, 4KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/universal_early_warning_signals.html` -- chat operator fingerprint 20260325 (research_article, 4KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/chat-operator-fingerprint-20260325.json` -- chat iso as neural filter 20260325 (research_article, 4KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/chat-iso-as-neural-filter-20260325.json` -- dair agentic engineering wiki (research_article, 4KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/dair_agentic_engineering_wiki.json` -- phase_transport_full_preprint (article, 4KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/phase_transport_full_preprint.pdf` -- Audit: Infrastructure Power Stage (The "Power Bridge" Platform) (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/infrastructure_alchemy_audit.md` -- SOVEREIGN MATH MODEL DATABASE (research_article, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/SOVEREIGN_MATH_MODEL_DATABASE.json` -- Energy-Aware Non-Linear Decompression (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hutter/ENERGY_AWARE_DECOMPRESSION.md` -- Cognitive Thermo — Thermodynamic Path Exploration (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hutter/COGNITIVE_THERMO_README.md` -- Physical Audit: Sovereign Cement (Adversarial Review) (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/sovereign_cement_physics_audit.md` -- Technical Specification: AAS Soliton Sorting (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/aas_soliton_sorting_spec.md` -- Training mRNA Language Models Across 25 Species for $165 (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/training-mrna-language-models-across-25-species-for-165.md` -- Evidence of the pair-instability gap from black-hole masses - Nature (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/evidence-of-the-pair-instability-gap-from-black-hole-masses-nature.md` -- Sparse Autoencoders on Codon Language Models (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/sparse-autoencoders-on-codon-language-models.md` -- Session Saga: Infohazard Containment Protocol (ICP) (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/SESSION_SAGA_INFOHAZARD_CONTAINMENT.md` -- behavioral merkle map (research_article, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/REVISED_EQUATIONS/behavioral_merkle_map.json` -- An ultra-high-resolution map of (dark) matter (chatgpt_md, 3KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/scognamiglio-an-ultra-high-resolution-map-of-dark-matter-2026.md` - Expert Audit: Cheap MEMS as Signal Waveguides (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/mems_waveguide_audit.md` -- Spec: N-Space Resilience Strain Gauge (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/n_space_strain_gauge_spec.md` -- Technical Specification: AAS-Enhanced VM Substrate (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/aas_vm_substrate_integration.md` -- Spec: The Sovereign Lattice (N-Space Structural Synthesis) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/sovereign_lattice_spec.md` - Technical Specification: AAS-Optimized Quantum Annealing (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/aas_quantum_annealing_optimization.md` - google doc sources (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/google_doc_sources.txt` -- Technical Specification: AAS-Enhanced SHA256 Encoding (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/aas_sha256_encoding_enhancement.md` -- Spec: N-Space Structural Synthesis (Topological 3D) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/n_space_structural_spec.md` - Physicists Found Something That Can Move Faster Than Light: The Darkness Inside It (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/physicists-found-something-that-can-move-faster-than-light-the-darkness-inside-it.md` - Technical Specification: AAS-Enhanced Pi Computation (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/aas_pi_computation_enhancement.md` -- Deep Dive: The Metanarrative Harness (v5-N++) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/metanarrative_harness_deep_dive.md` -- chat iso precompression 20260325 (research_article, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/chat-iso-precompression-20260325.json` -- Chaos-First Test Rig Design (Resonant Power Bridge) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/test_rig_design.md` -- Spec: Sovereign Cement (DAG-Enhanced 3DCP) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/sovereign_cement_spec.md` - Technical Report: Multi-Variable Sensitivity & Entropy Breakdown (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/material_sensitivity_analysis_v1.md` -- Wormhole Mechanism Specification (Resonant Power Bridge) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/wormhole_mechanism_spec.md` -- tunnel Mechanism Specification (Resonant Power Bridge) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/tunnel_mechanism_spec.md` -- Competitive Analysis: Resonant v5-G vs. Modern Silicon (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/competitive_analysis.md` -- Sovereign Stack: Overview & Immediate Integration (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/sovereign_stack_overview.md` - TSM-VDP: Failure Mode Simulation (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/failure_mode_simulation.md` -- Superluminal Correlations in Ensembles of Optical Phase Singularities (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/bucher-superluminal-correlations-in-ensembles-of-optical-phase-singularities-2025.md` - TSM-VDP (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/planck_clock_audit.md` -- ms myelin glucose signaling 2026 05 04 (research_article, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/ms_myelin_glucose_signaling_2026-05-04.json` -- Spec: The Sovereign Tower (N-Space Structural Prototype) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/sovereign_tower_spec.md` -- Superluminal Correlations in Ensembles of Optical Phase Singularities (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/superluminal-correlations-in-ensembles-of-optical-phase-singularities.md` -- Proof & Directive: Sovereign Jenga Manufacturing (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/sovereign_jenga_gcode_proof.md` -- PTOS Security Mapping (Hardware Hardening) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/ptos_security_mapping.md` -- Bridge Protocol Specification: Bitcoin L2/L3 Integration (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/bridge_protocol_spec.md` -- Metanarrative Goal Spec: The Target Function (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/metanarrative_goal_spec.md` -- Long-Term Roadmap: Resonant Power Bridge (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/long_term_roadmap.md` - Tech Note: N->3 Projection Logic (The Streamline Algorithm) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/n_space_projection_logic.md` -- Geometry from quantum temporal correlations (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/geometry-from-quantum-temporal-correlations.md` -- Spec: 20 THz Quasicrystalline NEMS Array (MOCVD) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/nems_fracking_array_spec.md` - Exploratory Audit: Ambient EM Harvesting (v5-H Expansion) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/ambient_em_harvesting_audit.md` -- chat substrate design 20260325 (research_article, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/chat-substrate-design-20260325.json` -- Report: VRT Software Stability & Resilience (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/vrt_stability_report.md` -- Audit: Power Miser Optimization (v5-J) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/power_miser_optimization.md` - Tang Nano 9K Pinout Information (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/tang_nano_9k_pinout.md` -- Model: Atmospheric Fracking Cycle (Londetite & Regolith) (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/fracking_cycle_model.md` -- Geometry from quantum temporal correlations (chatgpt_md, 2KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/fullwood-geometry-from-quantum-temporal-correlations-2025.md` -- categories (unknown, 2KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/categories.yml` -- BOM: Resonant Power Bridge Platform (v5-N++) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hardware_bom_v5n.md` -- Spec: Londetite Energy Storage (Solid-State Fuel) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/londetite_storage_spec.md` -- Tech Note: Projective Interlock (The Jenga Proof) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/projective_interlock_logic.md` - Audit: Pentagonal Phased Array (v5-M) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/phased_array_audit.md` -- Pre-SME Adversarial Audit: Persona Gene Drive Pass (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/pre_sme_adversarial_audit.md` -- Graph-Based SQL Substrate: Technical Specification (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/graph_sql_deep_dive.md` -- Wolfram Alpha Analytical Input Sheet (AAS-Integration) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/wolfram_alpha_input_sheet.md` -- TSM-VDP: System Reliability & Stability Audit (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/grey_goo_safety_audit.md` -- Sovereign Math Model Database: Instance Report (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/SOVEREIGN_MATH_DATABASE_INSTANCE.md` -- Audit: Thermodynamic Power Computation (Power-as-Logic) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/wire_centric_computing_audit.md` -- Tech Note: Mechanical Merkle Tree (Proof-of-State) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/mechanical_merkle_tree_logic.md` -- PCB Design Specification: Graph VM Logic Substrate (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/substrate_pcb_spec.md` - Audit: Plasma Gasification (Waste-Free NEMS Mode) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/plasma_gasification_audit.md` - Audit: Closed-Loop Regolith Fixation (Fertility Cycle) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/regolith_fixation_audit.md` -- Audit: Quantum Evolution & Self-Organization (v5-K) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/quantum_evolution_audit.md` -- Audit: Sovereign Jenga Efficiency & Stability (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/jenga_efficiency_audit.md` - adversarial rebuttal (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/adversarial_rebuttal.md` -- Cognitive Load + Trinary Clock Integration (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hutter/COGNITIVE_LOAD_INTEGRATION.md` - Audit: IR Rayleigh Entropy Sensing (v5-N) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/rayleigh_entropy_audit.md` -- Audit: Holographic Fractal Connectome (Budget Edition) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/fractal_connectome_audit.md` -- Technical Specification: Verifiable Data Provenance (VDP) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/verifiable_provenance_spec.md` -- Audit: Passive R-L-C-P Field Computation (v5.0 Final) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/passive_field_audit.md` -- Retrieval Comparison: NoSQL vs Collective Substrate (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/retrieval_comparison.md` -- Downloads Batch 2026-04-02 (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/downloads-batch-20260402.md` - Audit: 1000-Hour Extreme Stress Test (v5-B) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/village_stabilizer_audit.md` -- Audit: Resonant v5-K "Resonant Echo" (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/resonant_echo_v5k_audit.md` - Audit: STARK AIR Constraints (v5-L) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/stark_air_audit.md` -- Spec: Qutrit State-Space (Sovereign Signal Tier) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/qutrit_state_spec.md` -- Deployment Guide: Resonant v5-B Village Power Stabilizer (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/village_deployment_guide.md` -- Audit: Memistor-Adaptive Logic (The Widrow Approach) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/memistor_logic_audit.md` - Audit: Phase-Change Thermopile (v5-H) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/thermopile_synthesis_audit.md` - Audit: n-ZK-STARK Attestation (v5-L) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/zk_stark_attestation_audit.md` -- Audit: ISO-Standard Grid-Mesh (v5-F) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/grid_mesh_audit.md` -- Audit: Topological Memistor Emulation (The Filament Approach) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/topological_memistor_audit.md` - Audit: Cascading Voltage Wave Resilience (v5-E) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/cascade_resilience_audit.md` - Audit: 100,000-Hour "Nightmare Grid" Endurance (Steroid Level) (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/longevity_audit_100k.md` -- The House, The Player, and Zero (chatgpt_md, 1KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/hutter/COGNITIVE_WHEEL_README.md` -- session sovereign stack rev a boot 20260401 (research_article, 0KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/session-sovereign-stack-rev-a-boot-20260401.json` - manifest 20260318T231040Z (research_article, 0KB) — `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/vault/manifest_20260318T231040Z.json` - manifest (research_article, 0KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/babbage-to-babcock/substack_bundle/manifest.json` -- metadata (unknown, 0KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/babbage-to-babcock/metadata.yml` - Articles (chatgpt_md, 0KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/README.md` - manifest (research_article, 0KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/meme-math-that-pays-rent/substack_bundle/manifest.json` -- metadata (unknown, 0KB) — `/home/allaun/Documents/Research Stack/6-Documentation/articles/meme-math-that-pays-rent/metadata.yml` ## Maintenance Log | Date | Action | Detail | |------|--------|--------| -| 2026-05-07 | sources.md generated | 108 covered, 204 uncovered | \ No newline at end of file +| 2026-05-07 | sources.md generated | 232 covered, 67 uncovered | \ No newline at end of file diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Paper Yu 2025 ApJ 995 205.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Paper Yu 2025 ApJ 995 205.tid new file mode 100644 index 00000000..f075ee32 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Paper Yu 2025 ApJ 995 205.tid @@ -0,0 +1,18 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Article Papers Astrophysics +title: Paper Yu 2025 ApJ 995 205 +type: text/vnd.tiddlywiki + +! Paper Yu 2025 ApJ 995 205 + +Article from The Astrophysical Journal, 2025, Vol. 995, p. 205 (2063KB PDF). +Durable Source: `/home/allaun/Documents/ingest/Yu 2025 ApJ 995 205` + +[Pending detailed review and compilation.] + +!! Links + +* [[Research Papers Index]] +* [[Physics Compression Bridge]] +* [[Cosmic Structure]] diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Paper rsif 2022 0562.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Paper rsif 2022 0562.tid new file mode 100644 index 00000000..1af9d134 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Paper rsif 2022 0562.tid @@ -0,0 +1,18 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Article Papers Biology Interface +title: Paper rsif 2022 0562 +type: text/vnd.tiddlywiki + +! Paper rsif 2022 0562 + +Article from Journal of the Royal Society Interface (1258KB PDF). +Durable Source: `/home/allaun/Documents/ingest/rsif.2022.0562` + +[Pending detailed review and compilation.] + +!! Links + +* [[Research Papers Index]] +* [[Extremophile Constraint Layer]] +* [[Biology as PDE Manifold]] diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Paper s41378-025-00875-w.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Paper s41378-025-00875-w.tid new file mode 100644 index 00000000..8bccd8b0 --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Paper s41378-025-00875-w.tid @@ -0,0 +1,18 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Article Papers MEMS +title: Paper s41378-025-00875-w +type: text/vnd.tiddlywiki + +! Paper s41378-025-00875-w + +Research article from Microsystems & Nanoengineering (2616KB PDF). +Durable Source: `/home/allaun/Documents/ingest/s41378-025-00875-w` + +[Pending detailed review and compilation.] + +!! Links + +* [[Research Papers Index]] +* [[Materials and Hardware Mining]] +* [[Hardware Probing Research Index]] diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Q-Fox Primary Development Machine.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Q-Fox Primary Development Machine.tid new file mode 100644 index 00000000..575dc75b --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Q-Fox Primary Development Machine.tid @@ -0,0 +1,101 @@ +title: Q-Fox (Primary Development Machine) +tags: infrastructure hardware workstation +created: 20260507 +modified: 20260507 + +# Q-Fox — Primary Development Machine + +## Overview + +| Field | Value | +|-------|-------| +| **Hostname** | Q-Fox | +| **Role** | Primary development, compilation, simulation, and orchestration host | +| **OS** | CachyOS Linux (Arch-based) | +| **Kernel** | 7.0.3-1-cachyos | +| **Architecture** | x86_64 | + +--- + +## CPU + +| Field | Value | +|-------|-------| +| **Model** | AMD Ryzen 5 9600X (Granite Ridge) | +| **Cores** | 6 physical / 12 logical (SMT) | +| **Base Clock** | 628 MHz (min) | +| **Boost Clock** | 5,486 MHz (max) | +| **L1d Cache** | 288 KiB (6 × 48 KiB) | +| **L1i Cache** | 192 KiB (6 × 32 KiB) | +| **L2 Cache** | 6 MiB (6 × 1 MiB) | +| **L3 Cache** | 32 MiB (unified) | +| **ISA Extensions** | AVX-512 (F, DQ, IFMA, CD, BW, VL, BF16, VBMI, VBMI2, VNNI, BITALG, VPOPCNTDQ, VP2INTERSECT), AVX2, AVX-VNNI, SHA-NI, AES | +| **Virtualization** | AMD-V | +| **TDP** | 65W (nominal) | + +--- + +## Memory + +| Field | Value | +|-------|-------| +| **Total** | 31.1 GiB (DDR5) | +| **Type** | DDR5 (AM5 platform) | +| **Swap** | 30.4 GiB (zram) | + +--- + +## Storage + +| Device | Size | Type | Model | +|--------|------|------|-------| +| `/dev/nvme0n1` | 1.8 TB | NVMe PCIe 4.0 | MSI M480 PRO 2TB | + +| Partition | Size | Usage | +|-----------|------|-------| +| `/dev/nvme0n1p2` (/) | 1.9 TB | 98% used (45G free) | + +--- + +## GPU + +| Field | Value | +|-------|-------| +| **Model** | AMD Radeon Graphics (Granite Ridge iGPU) | +| **Architecture** | RDNA 2 (integrated) | +| **VRAM** | Shared system memory | +| **PCI ID** | `12:00.0 VGA compatible controller: AMD/ATI Granite Ridge [Radeon Graphics] (rev c6)` | + +--- + +## Networking + +| Interface | Type | Address | +|-----------|------|---------| +| `enp14s0` | Ethernet (Realtek) | IPv6 only | +| `wlan0` | WiFi | 192.168.1.118/24 | +| `tailscale0` | Tailscale VPN | Mesh overlay | + +--- + +## Research Stack Relevance + +| Capability | Stack Use | +|-----------|-----------| +| AVX-512 (full suite) | Q16.16 fixed-point vectorization, PIST encode/decode, FAMM delay computation | +| 12 threads | 11-agent swarm + 1 orchestrator thread | +| 32 MiB L3 cache | Fits full topological device plan in cache-resident state | +| 31 GiB RAM | Virtual FPGA cluster (5× Tang Nano 9K) fits in memory | +| NVMe 4.0 | Fast Lean 4 lake builds, Verilator simulation traces | +| AVX-512 BF16 | bf4prover bfloat16 proof search acceleration | +| SHA-NI / AES | Receipt hashing, invariant witness compression | +| AMD-V | Nested virtualization for sandboxed prover execution | + +--- + +## Notes + +- 98% disk usage — cleanup recommended before large builds +- No discrete GPU — all compute on CPU (sufficient for current stack) +- CachyOS provides optimized kernel with BORE scheduler and LTO builds +- zram swap at 30.4 GiB matches physical RAM (1:1 ratio) diff --git a/6-Documentation/tiddlywiki-local/wiki/tiddlers/Research Papers Index.tid b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Research Papers Index.tid new file mode 100644 index 00000000..5f0e8f8d --- /dev/null +++ b/6-Documentation/tiddlywiki-local/wiki/tiddlers/Research Papers Index.tid @@ -0,0 +1,30 @@ +created: 20260507000000000 +modified: 20260507000000000 +tags: ResearchStack Article Research Papers +title: Research Papers Index +type: text/vnd.tiddlywiki + +! Research Papers Index + +Research papers and articles referenced in or relevant to the Research Stack, +found in `/home/allaun/Documents/ingest/` and `/home/allaun/Documents/Research Stack/shared-data/data/germane/research/`. + +!! Ingested Papers + +* [[Paper s41378-025-00875-w]] — Microsystems & Nanoengineering article (2616KB) +* [[Paper Yu 2025 ApJ 995 205]] — Astrophysical Journal article (2063KB) +* [[Paper rsif 2022 0562]] — J. R. Soc. Interface article (1258KB) +* [[Malicious AI Swarms Democracy]] — AI swarm safety paper (248KB PDF) +* [[Abelian Sandpile Model Article]] — [[Hybrid Abelian Non-Abelian Sandpile]] reference + +!! Durable Sources + +* `/home/allaun/Documents/ingest/s41378-025-00875-w` +* `/home/allaun/Documents/ingest/Yu 2025 ApJ 995 205` +* `/home/allaun/Documents/ingest/rsif.2022.0562` + +!! Maintenance Log + +| Date | Action | +|------|--------| +| 2026-05-07 | Index created from `wiki_builder_shim` scan | diff --git a/6-Documentation/tiddlywiki-local/wiki/wbs_skip.txt b/6-Documentation/tiddlywiki-local/wiki/wbs_skip.txt index 242cad69..3723ea19 100644 --- a/6-Documentation/tiddlywiki-local/wiki/wbs_skip.txt +++ b/6-Documentation/tiddlywiki-local/wiki/wbs_skip.txt @@ -36,3 +36,17 @@ InvariantSurfaceConstitution_v2.md walkthrough_4_13_2026.md chatgpt_conversation.md freakingpaste.md +manifest 20260318T231339Z +manifest 20260318T231057Z +SovereignMathModel test vectors +behavioral taxonomy merkle +Tasks +The Ending +Articles +build manifest +attestestion file +manifest + +# Large PDFs / textbooks (not research papers) +HY_World_2_0.pdf +Agentic_Design_Patterns.pdf