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Author SHA1 Message Date
allaun
5f80fd8429 chore(repo): push local 768-commit branch state onto clean remote baseline 
This squashes all local history (768 commits) onto the scrubbed PR #90
baseline. Individual commits were lost during filter-repo corruption;
the working tree content is preserved intact.

Build: N/A (working tree state only)
 2026-06-15 22:46:50 -05:00
Allaun Silverfox
6c3986d4b6 Add Phys.org May 2026 source intake for bees, biocoatings, THz, and diamond membranes 2026-05-23 19:27:37 -05:00
Brandon Schneider
836b587573 docs: add external research import maps 2026-05-20 18:41:21 -05:00
Brandon Schneider
6544f0a150 Remove legacy Python prototypes superseded by Lean formalization 
Deleted 58 Python files (~31K lines) that were experimental prototypes
and bootstrapping scripts now superseded by the Lean source of truth:

0-Core-Formalism/core/ (2 files):
  - field_solver_emulator.py
  - formalize_mass_number.py

0-Core-Formalism/lean/LeanGPT/ (17 files):
  - All LLM bootstrapping scripts (algorithm_bootstrap, automated_conviction_loop,
    classify_algorithms, external_model_bridge, genetic_hypothesis_generator,
    group_algorithms_by_domain, hutter_prize_full_test, hutter_prize_test,
    hypothesis_generator, mathematical_law_conviction, otom_pipeline,
    performance_profiler, refine_algorithms_by_domain, skeptical_agent_concern_fix,
    skeptical_agent_swarm, wgsl_hypothesis_runner)

0-Core-Formalism/lean/Semantics/ (1 file):
  - expand_domains.py

0-Core-Formalism/otom/ (4 files):
  - scripts/validate_routing.py
  - tools/ene/ene_artifact_salvage_extractor.py
  - tools/genetics/emit_selection_receipt.py
  - tools/genetics/selection_metrics.py

2-Search-Space/ (14 files):
  - FAMM/solve_famm_sorry.py
  - GhostPivot/gist_pivot_poc.py
  - PIST/hybrid_tsm_pist_torus.py, pist_sweep.py
  - SVQF/microgrid_voxel_emulation.py
  - manifold/ (9 files: api/server, collapse_editor, particle_interaction,
    projection_engine, relativity_adapter, self_typing_engine, soliton_search,
    substrate_bridge)
  - search/generate_lut.py, ingest_pd.py, sweep_manifold.py

3-Mathematical-Models/ (20 files):
  - dna_benchmark/compressors/ (5 files)
  - pist_biological_polymorphic_shifter_v3*.py (5 files)
  - fiber_optic_vibrational_tensor/fiber_optic_tensor_network.py
  - manifold_compression/src/ (2 files)
  - fix_kwargs_meta.py, fix_metadata.py, fix_remaining.py, fix_sbox.py
  - genetics/Allelica/Allelica.py

These prototypes expressed formal concepts in Python that are now
formalized in Lean (747+ Lean modules). Per AGENTS.md, Lean is the
source of truth for formal claims.

Generated with [Devin](https://cli.devin.ai/docs)

Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
 2026-05-19 15:34:17 +00:00
Brandon Schneider
453a366949 collapse: prover orchestration layers, FAMM verilator harness, swarm topological prober, spec sheets, virtual FPGA system tests, merge conflict resolution 
- Prover-Integrated Orchestration Layers (L0-L3): Goedel-Prover-V2 watchdog, BFS-Prover-V2 swarm consensus, bf4prover topology adaptation
- FAMM Verilator benchmark: uniform vs preshaped delay comparison (4.4x speedup)
- Swarm topological device prober: 11 agents probing traces, caps, delays, errors, vias, PDN
- Spec sheet puller: 10 components with key params and topological relevance
- Virtual FPGA system tests: 6/6 passed, 134K ops/s throughput
- Fixed merge conflicts in AI-Newton test_experiment.ipynb
 2026-05-06 23:42:01 -05:00
Brandon Schneider
31f953bada Consolidate research stack updates 2026-05-05 21:09:48 -05:00
Allaun Silverfox
c0a4c1b6e1 Add selection metrics receipt emitter 2026-05-05 13:23:10 -05:00
Allaun Silverfox
159063b9cd Add selection metrics synthetic fixture 2026-05-05 13:22:32 -05:00
Allaun Silverfox
1c7784c09d Add q-desic and van der Waals gap DOIs to Consensus collection 2026-05-05 07:39:43 -05:00
Allaun Silverfox
9c180db864 Add frozen-in gravitational fields DOI to Consensus collection 2026-05-05 02:22:12 -05:00
Allaun Silverfox
548bc39c31 Add genetics selection metrics scaffold 2026-05-05 02:07:28 -05:00
Allaun Silverfox
07b2ea4784 Add genetics information substrate boundary 2026-05-05 02:01:27 -05:00
Allaun Silverfox
a4cda6ad1f Add de-anthropocentric Mass Number revision 2026-05-04 21:17:45 -05:00
Allaun Silverfox
299fc3fd52 Register visual primitive witness entry points 2026-05-04 19:10:11 -05:00
Allaun Silverfox
e77d29511e Add visual primitives goxel witness research note 2026-05-04 19:08:47 -05:00
Allaun Silverfox
abfbdc2c1e Wire visual primitive formalism into constitution 2026-05-04 19:08:12 -05:00
Allaun Silverfox
4a52398f1b Add visual primitive witness formalism 2026-05-04 19:07:01 -05:00
Brandon Schneider
4eee4a07f6 initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00