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5 commits

Author SHA1 Message Date
Brandon Schneider
7eda71868a refactor(rds): consolidate 14 psycopg2 connect patterns into shared rds_connect module
Creates 4-Infrastructure/shim/rds_connect.py with a single connect_rds()
function that resolves connection parameters in priority order:
  1. explicit kwargs
  2. DATABASE_URL env var (postgres://user:pass@host:port/dbname?sslmode=...)
  3. individual RDS_* env vars (RDS_HOST, RDS_PORT, RDS_USER, etc.)
  4. built-in defaults

Auth resolution (when password is empty or RDS_IAM=1):
  1. RDS_IAM_TOKEN env var (pre-computed)
  2. boto3 SDK generate_db_auth_token (preferred)
  3. subprocess aws rds generate-db-auth-token (fallback)
  4. RDS_PASSWORD env var (non-IAM)

Replaces 8 connection pattern variants across 14 active shims:
  - subprocess + RDS_IAM_TOKEN fallback: pist_trace_classify_mcp, joint_classifier,
    pist_prove_and_classify, ingest_57_flexures
  - boto3 SDK: ene_wiki_body_reingest, ene_migrate_and_tag, dataset_ingest_rds
  - subprocess + RDS_PASSWORD: batch_embed_artifacts, sync_wiki_to_rds, seed_flexure_dataset
  - RDS_IAM_AUTH: pist_classify
  - bashrc parsed: credential_loader

v1.4a benchmark confirmed at 100% after refactor.
2026-05-26 15:09:34 -05:00
Brandon Schneider
420bafc0e6 feat(pist): Route-Repair v1.1 — 60 failure flexures ingested, obstruction-type voting 2026-05-26 12:17:42 -05:00
Brandon Schneider
073a70eb86 WIP: accumulated changes 2026-05-25 16:24:21 -05:00
Brandon Schneider
cf0d588291 infra(vps): deploy Authentik, credential vault, age-sops, PQC, ARR plan
- LXC 100: Authentik 2025.4 with PostgreSQL 16 + Redis
- LXC 100: Credential vault HTTP service on port 9100 (PG-backed)
- VPS: Caddy reverse proxy with Let's Encrypt DNS-01 for researchstack.info,
  auth.researchstack.info, vault.researchstack.info
- VPS: Post-quantum SSH (mlkem768x25519-sha256) in sshd_config
- Repo: age-sops secret management enabled
  - Encrypt: .env, restic.env, credentials.json, appflowy.env,
    tailscale-auth.key, porkbun.env, API KEYS/*.txt
  - Add .sops.yaml at repo root and update k3s-flake/.sops.yaml
- Porkbun DNS: update A records to 46.232.249.226, add vault/auth subdomains
- Tailscale: auth key added to credential server (RackNerd microVM)
- Docs: PQC posture, VPS status, Authentik setup guide, ARR stack plan

Generated with [Devin](https://cli.devin.ai/docs)

Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
2026-05-20 18:00:11 -05:00
Brandon Schneider
fd863af6fd Expand devcontainer with full Python stack, add MCP servers (Notion/AWS), strengthen Lean theorems
- .devcontainer/Dockerfile: add PostgreSQL client libs, OpenSSL/libffi headers, gfortran/BLAS for scipy, rclone; install full Python dependency set (boto3, psycopg2-binary, fastapi, uvicorn, notion-client, httpx, pytest, numpy, scipy, etc.) in uv-managed venv; add rclone S3 gateway init script as ENTRYPOINT
- .devcontainer/devcontainer.json: switch from build to pre-built image (localhost/research
2026-05-19 01:52:14 -05:00