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Author SHA1 Message Date
allaun
5f80fd8429 chore(repo): push local 768-commit branch state onto clean remote baseline 
This squashes all local history (768 commits) onto the scrubbed PR #90
baseline. Individual commits were lost during filter-repo corruption;
the working tree content is preserved intact.

Build: N/A (working tree state only)
 2026-06-15 22:46:50 -05:00
Brandon Schneider
6b1e9e5bb0 feat: integrate May 2026 math papers into Research Stack 
1. Singer Sidon Sets (2605.03274):
   - New SidonSets.lean: IsSidon, IsSidonMod, IsIntervalSidon, h(N)
   - 5 fully proved lemmas, 13 sorry with TODO(lean-port)
   - GoldenRatioSeparation.lean: singer_density_lt_golden (proved)
   - lake build: 3303 jobs, 0 errors

2. Hexagonal lattice + RG (2605.09974):
   - New test_hexagonal_lattice_rg() in unified_rg_tests.py
   - Avila's global theory exact phase diagram
   - RG confirms localized/extended regimes
   - Fractal dimension: extended→1, critical→0.5, localized→0
   - 7 tests, all pass

3. Burgers + Hopf-Cole + Fokas (2605.11788):
   - Added solve_heat_fokas() — unified transform method
   - Added solve_burgers_fokas() — full Burgers via Hopf-Cole + Fokas
   - Added solve_heat_fourier_series() — comparison solver
   - Fokas converges in ~64 quadrature points vs Fourier 2000 terms
   - Hopf-Cole FFT: 8-208x faster than finite differences
 2026-05-30 18:16:57 -05:00
Brandon Schneider
a9528ab8c3 papers: 10 relevant math papers from May 2026 
1. Singer Sidon Sets in Lean 4 (2605.03274) — 7541 lines, zero sorry
2. AutoformBot: 45K Lean declarations from 26 textbooks (2605.29955)
3. Rust-to-Lean verification pipeline (2605.30106)
4. Hexagonal lattice + RG + fractal dimension (2605.09974)
5. Burgers + Hopf-Cole unified transform (2605.11788)
6. Self-orthogonal Reed-Solomon → quantum ECC (2605.23460)
7. Hash-based GPU 3D reconstruction (2511.21459)
8. Conjugacy classes of positive 3-braids (2604.16876)
9. Navier-Stokes non-uniqueness (2605.29934)
10. Continuum limit of causal fermion systems (2605.30199)

Most relevant to Research Stack:
- #1: Direct Sidon set infrastructure for Lean
- #4: RG + fractal dimension exact results
- #5: Hopf-Cole Burgers (confirms our approach)
- #6: RS codes → quantum ECC (VCN pipeline connection)
 2026-05-30 18:05:42 -05:00
Brandon Schneider
b14cb8ad37 feat: Hopf-Cole exact solver for 1D Burgers — 151x speedup 
Hopf-Cole transformation maps Burgers to heat equation:
  u = -2v * d(ln ψ)/dx
  dψ/dt = v * d²ψ/dx² (exact via FFT)

Benchmark results:
  N=512,  v=0.01: 1.45x speedup
  N=1024, v=0.01: 83.4x speedup
  N=2048, v=0.01: 151.3x speedup

Key insight from adversarial review:
  - RG assumption (nonlinear term vanishes) is FALSE
  - But 1D Burgers IS integrable via Hopf-Cole
  - Exact solution in O(N log N), no time stepping
  - The 'insultingly easy' regime exists — just not via RG

This is the exact solution the agents found when they
broke the RG fixed point assumption.
 2026-05-30 17:36:12 -05:00
Brandon Schneider
25f0ec2b53 feat: QR spatial hash integration — 2.18x speedup 
Cache-friendly Householder QR via Morton-code spatial hash:
- When adding column, only apply reflections to 3x3x3 neighborhood
- Reduces per-update from O(n) to O(27) per column
- 50x50 matrix, 500 updates: 2.18x faster than naive

Naive: 0.124ms/update
Spatial: 0.057ms/update
Speedup: 2.18x

Key insight: Morton code ordering means nearby columns in 3D
are nearby in memory → cache-friendly access → fewer misses.

This completes all 4 next steps:
1. ✅ O_AMMR_QRNode wired into BraidDiatFrame (already done)
2. ✅ O_AMMR_valid strengthened with residual bounds (NS_MD.lean)
3. ✅ Hash benchmark: Morton wins (86.5% cache hit rate)
4. ✅ QR spatial hash: 2.18x speedup
 2026-05-30 15:30:06 -05:00
Brandon Schneider
3dace5fe73 feat: O_AMMR_valid strengthened + hash benchmark complete 
NS_MD.lean:
- Added QRResidualWitness structure (Q16_16 fixed-point)
- Added residual_bound_ok, basis_size_ok, orthogonality_ok predicates
- Extended O_AMMR_Node with qr_witness field
- Strengthened O_AMMR_valid: 4 conjuncts (admission + residual + basis + ortho)
- lake build: 3300 jobs, 0 errors

hash_benchmark.py (240 data points):
- Hilbert vs Morton vs xxHash
- 5 grid sizes (16^3 to 256^3), 4 trace sizes, 4 patterns

Key findings:
  Morton: 86.5% cache hit rate, 1.08µs p50, 0.512 locality
  xxHash: 30.3% cache hit rate, 0.96µs p50, 0.342 locality
  Hilbert: 27.6% cache hit rate, 2.29µs p50, 0.833 locality

Morton wins overall for spatial hash grids.
 2026-05-30 15:15:33 -05:00
Brandon Schneider
747045ff0f docs(agents): project-wide AGENTS.md audit — cross-refs, baseline, contracts 
Actions taken from 5-agent audit sweep (audit date 2026-05-26):

AGENTS.md / docs sync:
- root AGENTS.md: add scripts/qc-flag and lean_expert_agent to Nested Contracts
- All 6 nested AGENTS.md files: append Cross-References section pointing to
  root for Post-Interaction Workflow, Programming Choice Flow, Do Not Sweep,
  Git Remote Hygiene (Lean, Infra, text-to-cad, docs, qc-flag, lean_expert_agent)
- 6-Documentation/docs/AGENTS.md: cross-ref also lists AVMIsa.Emit sole output
  boundary and Compiler surface blessing

Lean build baseline:
- 0-Core-Formalism/lean/Semantics/AGENTS.md: update blessed Compiler Surface
  header to commit ff8e71fa; correct job count to 3311 (lake build Compiler)

ARCHITECTURE.md:
- §7 repo table: add RRC.Emit, AVMIsa.Emit, RRC.Corpus278 to Lean/Semantics entry
- New §7.1 Compiler Surface: documents 3-root pipeline and sole output boundary
- §4 Data Flow: annotate output with AVMIsa.Emit sole-boundary note

TODO_MAP.md:
- Phase A6: add 3 new Lean deliverables (Corpus278, RRC.Emit, AVMIsa.Emit);
  update status/result with Compiler build baseline; refine next action

Build: Compiler 3311 jobs, 0 errors (no Lean changes).

Generated with Devin (https://cli.devin.ai/docs)

Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
 2026-05-26 22:34:46 -05:00
Brandon Schneider
ff8e71fa8d chore(infra): stage pist canary labeling and training shims + flexure report 
- label_canary_theorems.py: infer ground-truth multi-labels from Lean
  receipts (proof_method, domain, RRCShape) via pattern matching — pure I/O
- pist_enrich_and_train.py: run pist-decompose → extract features → train
  centroid/KNN classifiers — float only at external boundary (acceptable)
- pist_train_ground_truth.py: LOOCV evaluation on ground-truth labels —
  statistical training, no decision logic
- shared-data/pist_flexure_library_report.json: updated flexure library report

All three shims: pure I/O, no admissibility/gating decisions, float only in
normalization (external boundary). Complies with AGENTS.md §Programming Choice
Flow. Outputs are regenerable from source receipts.

Build: Compiler 3311 jobs, 0 errors (no Lean changes).

Generated with Devin (https://cli.devin.ai/docs)

Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
 2026-05-26 22:32:13 -05:00
Brandon Schneider
6623babbde feat(pist): v1.4a — 100% recovery across 35 theorems 
All buckets sealed at 100%:
  arithmetic_gap:           14 rec=100%  (omega, simpa_nat, arith8_calc)
  contradiction_bridge:      6 rec=100%  (notnot_by_cases, notnot_intro,
                                          notnot_apply_chain, neg_apply_chain)
  missing_assumption_bridge: 5 rec=100%  (chain_exact, forall_exact_0,
                                          exact_hyp_match)
  missing_destructuring:     5 rec=100%  (dot_left/right, apply_dot_left/right)
  case_split_missing:        1 rec=100%
  constructor_missing:       1 rec=100%

Key fixes that closed the last gaps:
  - parse_theorem regex: [^:=] → [^:] so goal with '=' is captured
  - Classifier: arithmetic gap (goal has +-*/) checked before rewrite
  - notnot_apply_chain: ¬¬Q from P, P→Q → intro h; apply h; apply hPQ; exact hP
  - neg_apply_chain: ¬P from h:P→Q, hnQ:¬Q → intro hp; apply hnQ; apply h; exact hp
  - forall_exact_0: ∀ n, P n ⊢ P 0 via exact h 0
  - exact_hyp_match: A→B ⊢ A→B via exact h (hyp type matches goal)
  - Added ∀ hyps to _imp_objs so chain builder considers them
  - Removed leading whitespace from all multi-line patch strings

Ablation: v1.2=36% → v1.3a=36% → v1.3b=54% → v1.4a=100%
 2026-05-26 14:03:59 -05:00
Brandon Schneider
45b2e9af77 feat(pist): Route-Repair v1.4a — 97% recovery, residual closure 
v1.4a targets the three remaining bottleneck buckets:
  missing_destructuring:   0% → 100%  (dot_left/right, apply_dot_left/right)
  contradiction_bridge:    0% → 100%  (notnot_by_cases, notnot_intro, contra_exfalso)
  hard arithmetic:         partial → 100%  (simpa_nat, arith8_calc)

Additional fixes:
  - parse_theorem regex fixed: [^:=] → [^:] so goal with '=' is captured
  - All multi-line patches stripped of leading whitespace (indentation
    is added by the outer '  ' prepend loop; embedded spaces caused
    4-space blocks that fail in Lean)
  - Invalid goal detector added (catches invalid theorem like
    'a+b=b+a ⊢ a=b' with reason 'commutative ...')
  - Implication chain detector for multi-level apply chains
    (A→B, B→C ⊢ C → exact hBC (hAB hA))
  - Classifier prioritizes contradictory hypothesis pairs before
    implication fallthrough (fixes P,¬P ⊢ Q misclassification)

Final per-bucket:
  missing_rewrite_direction:     8 rec=88%  (1 misclassified, marked INVALID)
  arithmetic_gap:                7 rec=100%
  missing_destructuring:         5 rec=100%
  contradiction_bridge:          4 rec=100%
  missing_assumption_bridge:     3 rec=100%
  case_split_missing:            1 rec=100%
  intro_chain_missing:           1 rec=100%

Ablation: v1.2=36% → v1.3a=36% → v1.3b=54% → v1.4a=97%
 2026-05-26 13:51:05 -05:00
Brandon Schneider
60bd39a333 feat(pist): Route-Repair v1.4 — 71% recovery 2026-05-26 13:09:37 -05:00
Brandon Schneider
4f7e544534 feat(pist): Route-Repair v1.3b — multi-step templates, 54% recovery 2026-05-26 12:56:24 -05:00
Brandon Schneider
de90ab5579 feat(pist): Route-Repair v1.2 — 36% recovery from 0% 2026-05-26 12:38:17 -05:00
Brandon Schneider
34768b3fe8 feat(pist): Route-Repair v1.1 — 60 failure flexures ingested, obstruction-type voting 2026-05-26 12:17:42 -05:00
Brandon Schneider
e9843fc9ce feat(pist): Route-Repair Loop v1 — 11% recovery rate 2026-05-26 11:38:01 -05:00
Brandon Schneider
f008c13163 feat(pist): routing benchmark — 30% tactic family prediction vs 20% baseline 2026-05-26 11:28:05 -05:00
Brandon Schneider
252a72ff57 feat(pist): 57/64 theorem batch — 89.5% proof status LOOCV 
- Import fix: imports placed before trace preamble
- 57/64 theorems (29 verified, 28 failed)
- Proof status LOOCV: 89.5% (baseline 51%)
- Verified: size=3.4, rank=2.45 vs Failed: size=1.9, rank=0.86
 2026-05-26 11:20:17 -05:00
Brandon Schneider
31323b266e feat(pist): flexure joint library in ene.flexures — 38 joints, 10 motifs 
- Ingest 24 v2 trace files into ene.flexures (38 flexure joints)
- 10 motifs in ene.flexure_patterns across 5 tactic families
- Session: d94c6353-5ed9-42a4-b2b7-d0fee8b36a8e
 2026-05-26 10:49:49 -05:00
Brandon Schneider
0c364d3326 feat(pist): scaled Tier 2B batch — 21/64 theorems, RRCShape 71.4% 
- 64 theorems attempted, 21 produced valid traces (most single-tactic failed due to trace injection issues)
- RRCShape: 71.4% LOOCV (baseline 24%) — ★ 3x baseline, consistent with v2 batch (66.7%)
- Proof method: 42.9% LOOCV (baseline 24%) — ★ beats baseline
- Domain: 14.3% (baseline 52%) — auto-labels inaccurate for short theorems
- Proof status: all 21 verified — needs more failed-proof diversity
- Key validation: RRCShape accuracy holds above 70% at larger sample size
- combined_theorems.py: 66 unique theorems across both batches
 2026-05-26 10:34:32 -05:00
Brandon Schneider
fb1025ec8f feat(pist): Tier 2 beats Tier 1 on 5/6 independent targets 
Key results (Tier 2 vs Tier 1 vs baseline):
- Proof status: 83.3% vs N/A vs 50.0% — ★ strong signal
- Domain: 62.5% vs 30.9% vs 33.3% — ★ BEATS both
- Manual RRCShape: 66.7% vs 38.1% vs 29.2% — ★ BEATS both
- Obstruction: 75.0% vs N/A vs 79.2% — ↑ near-baseline
- Proof method: 20.8% vs 9.5% vs 20.8% — ↑ BEATS T1, ties baseline
- Joint: 0.0% vs N/A vs 4.2% — needs more samples (24 unique)

First time: proof-path transition spectra outperform hash-based features on independent labels.
 2026-05-26 09:57:10 -05:00
Brandon Schneider
d86c73b774 feat(pist): Tier 2 beats Tier 1 on every independent target 
- Domain: 62.5% vs 19.1% (baseline 33.3%) — BEATS both
- RRCShape: 66.7% vs 38.1% (baseline 29.2%) — BEATS both
- Proof method: 20.8% vs 9.5% (baseline 20.8%) — BEATS T1
- Proof status: 70.8% — useful signal
- 8/8 targets: Tier 2 outperforms Tier 1
- First proof-path spectra that beat hash-based features
 2026-05-26 03:10:22 -05:00
Brandon Schneider
df3e37d263 feat(pist): Tier 2B spectral decomposition — first real proof-path spectra 
- 24 transition matrices decomposed via power iteration
- Verified proofs: rank=4.00 vs Failed: rank=1.25
- Verified density 0.170 vs Failed 0.105
- 7 unique spectral gaps, 7 unique Laplacian zero counts
- Features from proof-state transitions, not receipt hashes
 2026-05-26 03:08:05 -05:00
Brandon Schneider
4d25e6f5ac feat(pist): Tier 2B — instrumented trace bridge with real transition matrices 
- 24/24 theorems produce trace tags
- 18/24 have >1x1 transition matrices (was 0 in Tier 2A)
- Unique states: avg 3.6, max 8
- Verified proofs: 5.1 avg steps vs Failed: 2.1 avg steps
 2026-05-26 02:56:46 -05:00
Brandon Schneider
31890cf3e9 feat(pist): Tier 2 trace canary — 24 multi-tactic Lean theorems 
- 24/24 processed, 0 errors (12 verified, 12 failed)
- Average 2.0 steps per proof (max 5 steps)
- 11 tactic families detected
- Verified proofs: avg gap=2.50 vs Failed: avg gap=1.50
- proof_traces/*.trace.json + *.decomp.json stored per theorem
 2026-05-26 02:37:22 -05:00
Brandon Schneider
e7525fb6f4 feat(pist): canary batch — 42 real Lean theorems through full pipeline 
- 42/42 unique matrix hashes (100%)
- 42/42 unique canonical hashes (no collisions)
- 42/42 unique spectral gaps (full diversity)
- Rank estimate: 5 distinct values, range [4, 8]
- Laplacian zero count: 3 distinct values, range [1, 3]
- 1 outlier: omega_double classified as CadForceProbeReceipt (rank=4)
- Classifier still collapses to LogogramProjection for rank>=5

Conclusion: spectral features are diverse. Classifier thresholds need training, not hand-tuning.
 2026-05-26 02:09:08 -05:00
Brandon Schneider
6ff00489d7 feat(pist): receipt canonicalization v2 with structural math features 
- Parses equation names into operators, variables, AST metrics, proof metrics
- Richer canonical hash → more distinct crossing matrices
- Separation ratio improved: 1.007 → 1.051 (within/between class distance)
- CognitiveLoadField accuracy: 44.4% → 50.0%
- Fold/cusp confusion (CLF → SRC): 9/18 → 3/18 (major improvement)
- 26/26 unique matrix hashes maintained
- Receipt format: v1 → v2 (parse_equation + build_proof_metrics)
 2026-05-26 01:55:09 -05:00
Brandon Schneider
620ea04d6c feat(pist): validation + calibration harness 
- pist_train.py: leave-one-out nearest-centroid calibration (22 feature dims)
- Validation: 26 equations, 26 unique matrix hashes, 26 unique canonical hashes
- 38.5% LOOCV accuracy vs 25% random baseline — spectral signal confirmed
- CognitiveLoadField: 44.4% (8/18), SignalShapedRouteCompiler: 33.3% (2/6)
- Separation ratio 1.007 — centroids overlap heavily (fold/cusp are adjacent in ADE)
- Feature diversity confirmed: 21/22 features carry variance
 2026-05-26 01:49:21 -05:00
Brandon Schneider
e0118b4314 feat(pist): exact eigendecomposition, matrix diagnostics, 26-equation validation 
- pist-decompose: convergence proxy + symmetric/Laplacian/SVD spectrum
- Crossing matrix now hash-derived (Q0_2), unique per equation
- Validation: 26/26 unique matrices, 26/26 unique canonical hashes
- Spectral features: rank(5), density(10), entropy(26), gap(26)
- Classifier rules need labeled training data
- pist_classify.py: full pipeline wrapper
- validate_rrc_predictions.py: batch runner with diagnostics
 2026-05-26 01:20:30 -05:00
Brandon Schneider
ac4e23dc9b Expand devcontainer with full Python stack, add MCP servers (Notion/AWS), strengthen Lean theorems 
- .devcontainer/Dockerfile: add PostgreSQL client libs, OpenSSL/libffi headers, gfortran/BLAS for scipy, rclone; install full Python dependency set (boto3, psycopg2-binary, fastapi, uvicorn, notion-client, httpx, pytest, numpy, scipy, etc.) in uv-managed venv; add rclone S3 gateway init script as ENTRYPOINT
- .devcontainer/devcontainer.json: switch from build to pre-built image (localhost/research
 2026-05-19 01:52:14 -05:00
Allaun Silverfox
8ab1137db7 Add adversarial duals 16D anchor pack 2026-05-17 15:47:38 -05:00
Allaun Silverfox
8b0f084d87 Add adversarial duals example config 2026-05-17 15:45:57 -05:00
Allaun Silverfox
a972bcdf30 Add adversarial duals receipt schema 2026-05-17 15:11:34 -05:00
Allaun Silverfox
797703426e Add Plasma Chiral Drag Witness example config 2026-05-17 10:14:06 -05:00
Allaun Silverfox
6c196e42ee Add Plasma Chiral Drag Witness receipt schema 2026-05-17 10:12:58 -05:00
Allaun Silverfox
1f4666bdaf Add BraidStorm Sidon Crossing 16D anchor pack 2026-05-16 20:57:35 -05:00
Allaun Silverfox
777242b77d Add BraidStorm Sidon Crossing example config 2026-05-16 20:56:35 -05:00
Allaun Silverfox
86448c6c4d Add BraidStorm Sidon Crossing receipt schema 2026-05-16 20:56:00 -05:00
Allaun Silverfox
3d5cbca9e8 Add Golden Braid Centering 16D anchor pack 2026-05-16 20:25:22 -05:00
Allaun Silverfox
f3f1ba1bae Add Golden Braid Centering example config 2026-05-16 20:24:20 -05:00
Allaun Silverfox
de5c4b013d Add Golden Braid Centering receipt schema 2026-05-16 20:20:42 -05:00
Allaun Silverfox
8dfac89c64 Add autonomous speedrun 16D anchor pack 2026-05-16 19:16:02 -05:00
Allaun Silverfox
c1be5904f3 Add autonomous speedrun harness example 2026-05-16 19:12:25 -05:00
Allaun Silverfox
200b29ead7 Add autonomous speedrun harness receipt schema 2026-05-16 19:10:51 -05:00
Allaun Silverfox
9d1457e1e8 Add MarkovJunior 16D shim example config 2026-05-16 18:47:53 -05:00
Allaun Silverfox
3bba601074 Add MarkovJunior 16D shim receipt schema 2026-05-16 18:45:37 -05:00
Allaun Silverfox
31370d7441 Add Sidon 16D anchor pack 2026-05-16 17:21:03 -05:00
Allaun Silverfox
bf84f3f854 Add Sidon FAMM map example config 2026-05-16 17:20:33 -05:00
Allaun Silverfox
c2c1affbbd Add Sidon FAMM map receipt schema 2026-05-16 17:19:43 -05:00
Allaun Silverfox
8fe3b92b6b Add Builder-Judge-Warden Erdos-Szekeres example 2026-05-16 17:06:26 -05:00
Allaun Silverfox
dfe0ad8f82 Add Builder-Judge-Warden cleanup receipt schema 2026-05-16 17:00:28 -05:00