# Recovered Research Stack Status Snapshot — 2026-04-29 ## Status ```yaml status: recovered_from_connector_state source: GitHub connector + uploaded-file context + current chat reconstruction scope: last major Research Stack work session ``` ## Current spine The recovered session was not one isolated thread. It moved through six connected workstreams: ```text 1. Measurement-standard registry 2. Semantic Number Pattern Search 3. Chandelier / genus-3 / pulsar gradient models 4. Multiscale pulsar marble-jar simulation + validator 5. Abstract-CoT equation integration 6. Doppler-aware gradient instrumentation ``` The unifying idea is: ```text artifact / equation / visual intuition / physical model → bounded source authority → normalized representation → trace / invariant / validator → HOLD unless gated → forest-map route update ``` ## 1. Measurement-standard registry Recovered commits: ```text 6b00cb2 Add SI 2019 exact constants pack 6cb4a2 Add extended physical constants foundation pack c714fe6 Add Research Stack reweight policy v0 5c7d811 Add measurement standards source catalog v0 4c9be60 Add measurement registry operating doctrine f85047c Add constants registry builder scaffold 7b1e7a9 Add measurement source adapter registry scaffold 8a2c1f1 Wire measurement adapters into constants registry builder ``` Recovered files: ```text research-stack/constants/si_2019_exact_constants_v0.json research-stack/constants/physical_constants_foundation_v0.json research-stack/weights/research_stack_weight_policy_v0.json research-stack/constants/measurement_standards_source_catalog_v0.json research-stack/constants/README_MEASUREMENT_REGISTRY.md src/plumbing/constants_registry_builder.ts src/plumbing/measurement_source_adapters.ts ``` Core rule: ```text A number is not knowledge until it carries: source → unit → exactness → uncertainty → conditions → authority → allowed use ``` Registry target: ```text BIPM / SI / CODATA / NIST national metrology institutes chemistry / thermophysical / materials / crystallography astronomy / geodesy / time / coordinate registries earth / atmosphere / ocean / climate particle / nuclear / radiation engineering / industrial standards biomedical / clinical measurement standards ``` Boundary: ```text full = federated standard-source catalog + adapters not = hand-entered constants pretending to be a world database ``` ## 2. Semantic Number Pattern Search Recovered commit: ```text 1570317 Add Semantic Number Pattern Search pipeline ``` Recovered file: ```text src/plumbing/semantic_number_pattern_search.ts ``` Expected run: ```bash npx tsx src/plumbing/semantic_number_pattern_search.ts ``` Expected outputs: ```text research-stack/constants/constants_registry_v0.json research-stack/semantic-number-patterns/numeric_motifs.json research-stack/semantic-number-patterns/numeric_pattern_roads.json research-stack/semantic-number-patterns/numeric_torsion_candidates.json research-stack/semantic-number-patterns/false_attractor_report.json ``` Core behavior: ```text constants registry + equation packs → numeric motifs → weighted pattern roads → torsion candidates → false-attractor report ``` Rule: ```text Every result remains HOLD. No numeric motif, exact constant, or shared pattern can become a basin without gates. ``` ## 3. Chandelier / genus-3 / blue-red shift gradient modeling Recovered commits: ```text 0e2fc47 Add chandelier genus-3 blueshift model note bd50665 Add chandelier genus-3 descent simulation cb22bf0 Add pulsar genus-3 two-component model 4e85ef8 Add pulsar genus-3 two-component simulation ``` Recovered files: ```text research-stack/models/chandelier_genus3_blueshift_model_v0.md scripts/chandelier_genus3_descent.py research-stack/models/pulsar_genus3_two_component_model_v0.md scripts/pulsar_genus3_two_component.py ``` Core correction: ```text There is no canonical vertical in n-space. "Down" = increasing torsion / decreasing accessible phase volume / decreasing free energy. ``` Physical mapping: ```text superfluid neutron vortices = chandelier filaments crustal lattice = rigid basin rim / pinning substrate vortex unpinning avalanches = phase-transition flashes magnetic dipole braking = damping / slow energy bleed glitch spin-up = angular momentum redistribution flash relativistic beaming = blue/red shift trace genus-3 = three reduced circulation routes ``` ## 4. Multiscale pulsar marble-jar simulation and validator Recovered commits: ```text ba6132d Add multiscale pulsar marble jar simulation 45cdc68 Add validator for multiscale pulsar marble jar simulation ``` Recovered files: ```text scripts/pulsar_marble_jar_multiscale.py scripts/validate_pulsar_marble_jar_multiscale.py ``` Run simulation: ```bash python3 scripts/pulsar_marble_jar_multiscale.py ``` Run validator: ```bash python3 scripts/validate_pulsar_marble_jar_multiscale.py ``` Expected outputs: ```text research-stack/models/pulsar_marble_jar_multiscale_outputs/multiscale_spin_down.png research-stack/models/pulsar_marble_jar_multiscale_outputs/multiscale_lag_torsion_phase.png research-stack/models/pulsar_marble_jar_multiscale_outputs/multiscale_angular_momentum_residual.png research-stack/models/pulsar_marble_jar_multiscale_outputs/multiscale_genus3_routes.png research-stack/models/pulsar_marble_jar_multiscale_outputs/multiscale_doppler_vortex.png research-stack/models/pulsar_marble_jar_multiscale_outputs/multiscale_glitch_sizes.png research-stack/models/pulsar_marble_jar_multiscale_outputs/multiscale_waiting_times.png research-stack/models/pulsar_marble_jar_multiscale_outputs/pulsar_marble_jar_multiscale_report.json research-stack/models/pulsar_marble_jar_multiscale_outputs/pulsar_marble_jar_multiscale_traces.csv research-stack/models/pulsar_marble_jar_multiscale_outputs/pulsar_marble_jar_multiscale_validation.json ``` Critical fix: ```text old failure: one arbitrary dt for all physics new model: cruise years, glitch rise seconds, recovery days ``` Validator checks: ```text finite traces time-scale separation lag accumulation glitch crust spin-up / superfluid spin-down lag reduction angular momentum conservation residual torsion vs accessible phase volume anticorrelation genus-3 route normalization and drift small non-explosive fractional spin jumps ``` ## 5. Abstract-CoT equation integration Recovered commits: ```text e757a36 Add Abstract-CoT integration manifest 614f89b Add Abstract-CoT equation pack d3d319b Add Abstract-CoT entropy formalization review 64f639b Add MATH_MODEL_MAP schema normalizer ``` Recovered files: ```text research-stack/models/abstract_cot_integration_v0.md research-stack/equation-packs/abstract_cot_equation_pack_v0.json research-stack/formal/abstract_cot_entropy_review_v0.md scripts/normalize_math_model_map.py research-stack/models/MATH_MODEL_MAP.abstract_cot.normalized.tsv ``` Six Abstract-CoT equations recovered: ```text Abstract_CoT_Marginal_Likelihood Abstract_CoT_Constrained_Decoding Abstract_CoT_Information_Bottleneck Abstract_CoT_Power_Law_Distribution Abstract_CoT_GRPO_Advantage Abstract_CoT_Compression_Ratio ``` Important Lean/formal boundary: ```text current mutualInformation / informationBottleneck additions are Q16_16 proxies not proof-complete mutual information formalization true MI requires joint distribution + marginals + Markov-chain assumption C → Z_abs → Y ``` Important TSV boundary: ```text uploaded Abstract_CoT rows were content-present but schema-misaligned normalizer expands compact 10-column rows into canonical 12-column rows ``` ## 6. Doppler-aware gradient instrumentation Recovered commit: ```text e038688 Add Doppler gradient integration note ``` Recovered file: ```text research-stack/gradient-models/doppler_gradient_integration_v0.md ``` Core requirement: ```text Gradient models need explicit blue-shift / red-shift dynamics. ``` Minimal proxy: ```text β_t = / c_eff shift_t = sqrt((1 + β_t) / (1 - β_t)) shift*_t = shift_t · (1 + κ τ_t) ``` Interpretation: ```text shift_t > 1 → blue-shifted descent / compression / impact approach shift_t < 1 → red-shifted retreat / relaxation / diffusion away shift_t ≈ 1 → neutral drift ``` Required trace fields: ```text time state_id basin_id energy energy_delta gradient_norm velocity_norm torsion_proxy accessible_phase_volume beta_eff doppler_shift red_blue_label flash_event phase_boundary_id route_weight_before route_weight_after ``` ## Current best next actions ### A. Execute generators locally ```bash npx tsx src/plumbing/constants_registry_builder.ts npx tsx src/plumbing/semantic_number_pattern_search.ts python3 scripts/pulsar_marble_jar_multiscale.py python3 scripts/validate_pulsar_marble_jar_multiscale.py ``` ### B. Add Doppler trace to existing simulations Patch: ```text scripts/chandelier_genus3_descent.py scripts/pulsar_genus3_two_component.py scripts/pulsar_marble_jar_multiscale.py ``` so they emit: ```text beta_eff doppler_shift red_blue_label flash_event phase_boundary_id ``` ### C. Route Abstract-CoT through Semantic Number Pattern Search Add `abstract_cot_equation_pack_v0.json` to the default equation pack list or run it as an explicit input. ### D. Keep solar-system region quarantined Recovered rule remains: ```text solar-system observations are not trusted as validation partners until separately verified ``` ## Recovered state in one sentence The project now has a measurement-authority backbone, numeric motif router, multiscale torsion/phase simulation family, Abstract-CoT compression bridge, and a new Doppler-aware gradient trace requirement — all still gated as HOLD unless validated by source, invariant, compile, or proof checks.