cff-version: 1.2.0
message: "If you use AlphaFold-derived structure priors, cite AlphaFold DB and the relevant structure or dataset publications."
type: dataset
title: "AlphaFold Bulk Structure Database Prior Sources"
authors:
  - name: "Research Stack Contributors"
date-released: 2026-05-08
url: "https://github.com/allaunthefox/Research-Stack"
repository-code: "https://github.com/allaunthefox/Research-Stack"
license: Apache-2.0
references:
  - type: dataset
    title: "AlphaFold Protein Structure Database Downloads"
    authors:
      - name: "EMBL-EBI"
      - name: "Google DeepMind"
    url: "https://alphafold.ebi.ac.uk/download"
    license: CC-BY-4.0
    notes: "External source cited as a biological structure corpus and bulk-download prior. Data is not vendored here."
  - type: software
    title: "AlphaFold Protein Structure Database FTP Area"
    authors:
      - name: "EMBL-EBI"
      - name: "Google DeepMind"
    url: "https://ftp.ebi.ac.uk/pub/databases/alphafold"
    license: CC-BY-4.0
    notes: "Bulk archive source for explicit, receipted ingest only."
  - type: article
    title: "Highly accurate protein structure prediction with AlphaFold"
    authors:
      - family-names: "Jumper"
        given-names: "John"
      - name: "et al."
    journal: "Nature"
    date-published: 2021
    doi: "10.1038/s41586-021-03819-2"
    url: "https://www.nature.com/articles/s41586-021-03819-2"
    notes: "Required citation for UniProt AlphaFold predictions where applicable."