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Cross-referenced against our prover orchestration layers: - Plan-Execute-Verify-Replan ↔ L0-L3 pipeline - Agents as specialists ↔ 11-agent swarm - Guardrails ↔ ProverWatchdog - Sandbox testing ↔ Virtual FPGA tests - Trajectory-aware eval ↔ BFS audit trail 5 gaps identified, 4 strengths confirmed
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782 B
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9 lines
782 B
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created: 20260507000000000
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modified: 20260507000000000
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tags: ResearchStack Biology AI Peptide MoE
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title: Peptide MoE
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type: text/vnd.tiddlywiki
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! Peptide MoE
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Peptide Mixture-of-Experts model for protein/peptide prediction. Lean modules: `PeptideMoE.lean`, `PeptideMoEExamples.lean`, `PeptideMoEFailure.lean`, `PeptideMoERepair.lean`. Part of the [[Swarm MoE Rewiring]] system for dynamic expert routing. The peptide pipeline connects codon sequences to protein structures through a learned mixture-of-experts architecture with repair/recovery mechanisms for prediction failures. Test data and review at `shared-data/data/swarm_peptide_moe_*`. Integrates with the [[Genetic Code Pipeline]] for codon-to-peptide translation and the [[RNA to Peptide Shifter]] for ribosomal modeling.
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