Research-Stack/6-Documentation/tiddlywiki-local/wiki/tiddlers/Semantic Graph Mining.tid
Brandon Schneider 679945c1a0 ingest: dair-ai Agentic Engineering Wiki (51 tips, 7 categories)
Cross-referenced against our prover orchestration layers:
- Plan-Execute-Verify-Replan ↔ L0-L3 pipeline
- Agents as specialists ↔ 11-agent swarm
- Guardrails ↔ ProverWatchdog
- Sandbox testing ↔ Virtual FPGA tests
- Trajectory-aware eval ↔ BFS audit trail

5 gaps identified, 4 strengths confirmed
2026-05-07 00:27:02 -05:00

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created: 20260507000000000
modified: 20260507000000000
tags: ResearchStack Search Graph Mining Semantic
title: Semantic Graph Mining
type: text/vnd.tiddlywiki
! Semantic Graph Mining
Semantic graph mining pipeline extracts concept graphs from the research corpus. Includes `5-Applications/scripts/build_graphml.py` (GraphML export), `build_manifold_graphml.py` (manifold-aware graphs), `compute_distance_matrix.py` (semantic distances), `cluster_supernodes.py` (community detection), and `build_unified_forest.py` (equation forest construction). The [[Graph-Evolving RAG]] system uses these graphs for retrieval-augmented generation. Mining outputs connect to [[HNSW Vector Search]] for ANN queries and [[Semantic Search]] (internal tool at `5-Applications/tools-scripts/search/`) for full-text retrieval. The [[Semantic Prime Refraction]] and [[Address-First Search Protocol]] provide specialized mining strategies.