All research stack related work and material is folded here, each project subdivided into it's own folders.
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Brandon Schneider 2bbf896d3f dag: strip all non-mathematical commentary from Physics/
REMOVED (8 narrative-only files):
  BreakPoints.lean, BrokenChains.lean, NewtonWalls.lean — zero theorems
  JupiterMoons.lean, ProtiumProbe.lean — no theorems, torsion speculation
  GWTorsionTest.lean — 1 trivial theorem, rest narrative
  PhotonTorsionProbe.lean — 0 theorems after placeholder removal
  RGManifoldSeams.lean — 2 theorems buried in narrative

STRIPPED (8 files):
  UniversalBridge.lean — removed '16D controller' narrative from header
  DESIInvariant.lean — removed 'horn-fiber' reference
  DESIModelProjection.lean — removed metaphor from theorem docstrings
  H0ValveTest.lean — removed 'horn-fiber' and 'valve' narrative
  ValveTestSuite.lean — removed all interpretation comments
  ClusterBHAnchors.lean — removed FAILURE narrative
  AdjacentCoprimeClassification.lean — removed project language injection
  (4 more files from earlier rip/tear already committed)

KEPT (6 files, math-only):
  UniversalBridge.lean, DESIInvariant.lean, DESIModelProjection.lean,
  H0ValveTest.lean, ValveTestSuite.lean, ClusterBHAnchors.lean,
  AdjacentCoprimeClassification.lean
2026-05-13 21:57:34 -05:00
.agents/plugins Consolidate research stack updates 2026-05-05 21:09:48 -05:00
.consolidation-manifests initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
.github Update issue templates 2026-05-12 04:59:55 -05:00
.vscode Document portable setup and review receipts 2026-05-11 23:01:51 -05:00
0-Core-Formalism dag: strip all non-mathematical commentary from Physics/ 2026-05-13 21:57:34 -05:00
1-Distributed-Systems Scrub tracked API key material 2026-05-11 22:25:43 -05:00
2-Search-Space Refresh whoogle dotenv advisory manifest 2026-05-11 23:27:19 -05:00
3-Mathematical-Models Track remaining source and documentation inventory 2026-05-11 22:18:31 -05:00
4-Infrastructure Add BodegaFlow horn-fiber refinements 2026-05-13 18:04:54 -05:00
5-Applications chore: preserve working tree before secure wipe 2026-05-13 17:36:02 -05:00
6-Documentation docs(system): separate FRT core from personal software inventory 2026-05-13 18:29:40 -05:00
6-Kernel-Shim Consolidate research stack updates 2026-05-05 21:09:48 -05:00
ai-math-discovery-systems chore: update AI-Newton submodule (merge conflict fix) 2026-05-06 23:44:25 -05:00
docs Harden optional science toolbelt probe 2026-05-12 05:12:46 -05:00
hooks initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
info initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
plugins/substack-connector Consolidate research stack updates 2026-05-05 21:09:48 -05:00
shared-data dag: full-stack assumption audit — 78 files, ~280 assumptions 2026-05-13 21:44:53 -05:00
workspace-config initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
.codeiumignore Add workspace load-shedding ignores 2026-05-11 15:53:59 -05:00
.gitattributes Add ENE research topic candidates, compression-core, notion-native-tauri, linear-native-tauri 2026-05-04 19:08:20 -05:00
.gitignore chore: preserve working tree before secure wipe 2026-05-13 17:36:02 -05:00
.gitmodules Fix external repository references 2026-05-05 21:15:26 -05:00
.mcp.json Merge math-first tooling guardrails 2026-05-11 23:34:48 -05:00
.pre-commit-config.yaml math-first: fix pre-commit evidence-gate filter bug, polish schema + validator 2026-05-12 04:40:20 +00:00
.python-version Track DeepSeek review receipts and CAD setup tasks 2026-05-11 22:41:44 -05:00
Agda_Test.agda collapse: prover orchestration layers, FAMM verilator harness, swarm topological prober, spec sheets, virtual FPGA system tests, merge conflict resolution 2026-05-06 23:42:01 -05:00
Agda_Test.agdai collapse: prover orchestration layers, FAMM verilator harness, swarm topological prober, spec sheets, virtual FPGA system tests, merge conflict resolution 2026-05-06 23:42:01 -05:00
AGENTS.md Add verified Ollama DeepSeek review emitter 2026-05-11 23:13:54 -05:00
ARCHITECTURE.md Refactor provenance sources for open witness backends 2026-05-12 05:57:04 -05:00
CHANGELOG.md Consolidate research stack updates 2026-05-05 21:09:48 -05:00
changes.zip initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
CITATION.cff Track HCMMR sources and ignore generated mirrors 2026-05-11 21:53:32 -05:00
claims.yaml Merge math-first tooling guardrails 2026-05-11 23:34:48 -05:00
CONCEPTS.md initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
config initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
description initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
desmos_reynolds_bridge.txt chore: preserve working tree before secure wipe 2026-05-13 17:36:02 -05:00
GETTING_STARTED.md Refactor provenance sources for open witness backends 2026-05-12 05:57:04 -05:00
HEAD initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
lean_hardware_checker_summary.json Consolidate research stack updates 2026-05-05 21:09:48 -05:00
LICENSE initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
NOTICE Track HCMMR sources and ignore generated mirrors 2026-05-11 21:53:32 -05:00
package-lock.json collapse: prover orchestration layers, FAMM verilator harness, swarm topological prober, spec sheets, virtual FPGA system tests, merge conflict resolution 2026-05-06 23:42:01 -05:00
package.json Harden optional science toolbelt probe 2026-05-12 05:12:46 -05:00
PROJECT_MAP.md initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
pyrightconfig.json wip: refined investigation script for Erdős–Gyárfás conjecture 2026-05-08 14:50:03 -05:00
README.md docs: set heretical science engineering as official repo image in README 2026-05-07 02:49:09 -05:00
requirements-optional-science.txt Add optional science toolbelt probe 2026-05-12 00:21:34 -05:00
system-packages-optional-science.txt Harden optional science toolbelt probe 2026-05-12 05:12:46 -05:00
test.lean initial: sovereign research stack (consolidated, weightless, and lfs-optimized) 2026-05-04 18:11:36 -05:00
THIRD_PARTY_NOTICES.md collapse: prover orchestration layers, FAMM verilator harness, swarm topological prober, spec sheets, virtual FPGA system tests, merge conflict resolution 2026-05-06 23:42:01 -05:00
TODO_MAP.md Add RRC projection receipts and roadmap mirrors 2026-05-08 14:50:03 -05:00

Research-Stack (OTOM)

Heretical Science Engineering

Ultra-low power, zero-decimal data routing and compression.

If you just stumbled across this repository, you might see words like "Topological State Machine" and "Manifold Points" and assume this is dense, academic magic. It isn't.

This project is actually built on a very simple, grounded idea: Modern computing is incredibly wasteful.

Right now, running AI or compressing massive datasets requires giant, power-hungry GPUs because they rely on Floating-Point Math (heavy decimals like 3.14159...). We prove that you don't need decimals. You can map complex data (like the grammar of the English language) into structural shapes, and navigate them using only simple integers (whole numbers).

Because we only use addition, subtraction, multiplication, and modulo, this system can run on a $15 blank-slate microchip (an FPGA) instead of a massive server farm.

🛠️ How we know it works (Zero Guesswork)

We do not guess that our integer math works. We prove it. The core of this project is written in Lean 4, a strict mathematical theorem prover. If our logic has a flaw, the code physically will not compile. We currently have over 3,500 mathematically verified proofs securing this engine.

Python, Rust, and Verilog only exist in this repository to act as "dumb pipes" to feed data into our proven mathematical core.


📁 Repository Structure (By Goal)

Everything is numbered so you know exactly what depends on what.

Folder What it actually is (Plain English)
0-Core-Formalism/ The Brain. Lean 4 code. The mathematically proven integer arithmetic. This is the source of truth.
1-Distributed-Systems/ The Network. Code for making multiple computers talk to each other to share the workload.
2-Search-Space/ The Navigator. Algorithms that search through our data shapes to find the best routes.
3-Mathematical-Models/ The Library. Where we store our databases of equations and compressed English grammar shapes.
4-Infrastructure/ The Drivers. Code that physically talks to the hardware, GPUs, and APIs.
5-Applications/ The Executables. Python scripts that run the system end-to-end. (These are just shims connecting data to our Lean 4 Brain).
6-Documentation/ The Manual. Where you'll find plain-English explanations and our theoretical papers.
shared-data/ Raw data, cache, and exported files.

📖 Where to start?

If you are new here, read these two files first:

  1. Explanation for Humans - A translation guide for our technical jargon.
  2. Calculator-Plain Math - Proof that every complex concept we use can be calculated on a high-school graphing calculator.

🚀 Quick Start

# 1. Compile the mathematically proven core (Takes ~1-2 minutes)
cd "0-Core-Formalism/lean/Semantics"
lake build

# 2. Run the English Manifold Builder (Compresses English via grammar shapes)
cd "../../.."
python3 5-Applications/scripts/redpajama_english_manifold.py

⚖️ The One Rule for Contributors

Lean is the source of truth. If you add logic, it goes in 0-Core-Formalism/lean/Semantics/ and must be mathematically proven. Python scripts may not contain complex math, branching logic, or cost functions. Python is just the delivery boy for Lean.


Research Stack — All Rights Reserved