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- Prover-Integrated Orchestration Layers (L0-L3): Goedel-Prover-V2 watchdog, BFS-Prover-V2 swarm consensus, bf4prover topology adaptation - FAMM Verilator benchmark: uniform vs preshaped delay comparison (4.4x speedup) - Swarm topological device prober: 11 agents probing traces, caps, delays, errors, vias, PDN - Spec sheet puller: 10 components with key params and topological relevance - Virtual FPGA system tests: 6/6 passed, 134K ops/s throughput - Fixed merge conflicts in AI-Newton test_experiment.ipynb
27 lines
751 B
Text
27 lines
751 B
Text
created: 20260506143000000
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modified: 20260506143000000
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tags: ResearchStack Compression Genomics Literature External
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title: Genomic Data Compression Anchor
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type: text/vnd.tiddlywiki
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! Genomic Data Compression Anchor
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A literature-backed anchor for genomic data compression and genetic algorithm
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search in the stack's biological compression lane.
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!! Why It Matters
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It gives [[PIST Shifters]], codon work, and Hutter-facing compression ideas a
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concrete bibliography row rather than only an internal analogy.
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!! Evidence
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* ENE source: `data/substrate_index.db`, `zotero_items` key `5V6OZSRC`
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* DOI: `10.1101/2025.10.23.684090`
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* Lane: [[ENE Substrate Mining]]
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!! Links
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* [[PIST Shifters]]
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* [[Optical Codon Decoder]]
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* [[Hutter Prize Compression]]
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