SilverSight/docs
allaunthefox 5331d2cc4e feat(dna): unified theory — DNA encoding, epigenetic computation, logarithmic vector spaces
Derivation from first principles:

1. Hachimoji DNA encoding (8 bases, ASCII-ordered, monotone LUT)
2. Imaginary Semantic Time (observer-independent semantic axis)
3. Sieve observers with CRT reconciliation (mod ℓ projections)
4. Semantic mass (E - E_min, E_s = m · 8²)
5. Gap preservation theorem (cleanMerge_preservesGap from GraphRank.lean)
6. Epigenetic computation (bistability, spreading, memory, attractors)
7. Logarithmic vector spaces (Kritchevsky: log N is a geometric vector)
8. Uncomputability framework (baseless logarithm = truth, based = computation)

Epigenetic optimizer breaks the freeze point:
  n=20: 0.7s (brute: 0.3s)
  n=24: 1.5s (brute: FROZEN)
  n=30: 3.4s (brute: FROZEN)
  n=50: 23.9s (brute: FROZEN)

Files:
  docs/UNIFIED_THEORY.md — full theory derivation
  docs/HACHIMOJI_DNA_SYNTAX.md — formal syntax specification
  docs/EPIGENETIC_COMPUTATION.md — epigenetic optimizer
  docs/UNCOMPUTABILITY.md — logarithmic vector space framework
  docs/REDERIVATION.md — rederivation from first principles
  python/dna_*.py — implementation (codec, LUT, GPU, surface)
  tests/test_dna_*.py — 68 tests, all green

Build: N/A (Python + Lean documentation)
2026-06-23 02:18:16 +00:00
..
build_logs chore: track pre-existing HachimojiLUT module and build log 2026-06-22 00:32:12 -05:00
concept_map feat(data): sync expanded concept map from Research Stack 2026-06-21 17:23:11 -05:00
reviews docs(silversight): bosonic monte carlo pipeline review 2026-06-22 01:05:06 -05:00
ARCHITECTURE.md feat(lean): add SilverSight Semantics core modules (Schema, Layout, WireFormat, View, LayoutBridge, CanalLayout) 2026-06-21 14:00:56 -05:00
EPIGENETIC_COMPUTATION.md feat(dna): unified theory — DNA encoding, epigenetic computation, logarithmic vector spaces 2026-06-23 02:18:16 +00:00
FINITE_INFINITY_DUALITY.md docs(silversight): Gödel boundary and classifier limits 2026-06-22 03:54:30 -05:00
generate_porting_candidates.py docs: bind ported concepts to CFF references 2026-06-21 06:49:14 -05:00
generate_project_map.py feat(rrc): bare-minimum RRC refactor into SilverSight 2026-06-21 09:08:48 -05:00
generate_research_stack_usage_map.py feat(rrc): bare-minimum RRC refactor into SilverSight 2026-06-21 09:08:48 -05:00
GLOSSARY.md feat(silversight): log prescreen + finite-infinity duality 2026-06-22 03:41:53 -05:00
GLOSSARY_ALLOWLIST.md docs(architecture): rewrite project plan and map old Research Stack layers 2026-06-21 09:17:25 -05:00
GODEL_BOUNDARY_AND_CLASSIFIERS.md docs(silversight): Gödel boundary and classifier limits 2026-06-22 03:54:30 -05:00
HACHIMOJI_DNA_ENCODING.md feat(dna): unified theory — DNA encoding, epigenetic computation, logarithmic vector spaces 2026-06-23 02:18:16 +00:00
HACHIMOJI_DNA_SYNTAX.md feat(dna): unified theory — DNA encoding, epigenetic computation, logarithmic vector spaces 2026-06-23 02:18:16 +00:00
hachimoji_torsor_consequences.md docs(hachimoji): document torsor consequences and update glossary 2026-06-22 00:55:54 -05:00
LIBRARY_MANIFEST.md Add SilverSight Core + Library Manifest + RRC placement 2026-06-21 05:59:43 -05:00
PROJECT_MAP.json docs(hachimoji): document torsor consequences and update glossary 2026-06-22 00:55:54 -05:00
PROJECT_MAP.md docs(hachimoji): document torsor consequences and update glossary 2026-06-22 00:55:54 -05:00
REDERIVATION.md feat(dna): unified theory — DNA encoding, epigenetic computation, logarithmic vector spaces 2026-06-23 02:18:16 +00:00
research_stack_porting_candidates.md docs: bind ported concepts to CFF references 2026-06-21 06:49:14 -05:00
research_stack_usage_graph.dot feat(rrc): bare-minimum RRC refactor into SilverSight 2026-06-21 09:08:48 -05:00
research_stack_usage_graph.json docs: add Research Stack searchable usage point graph 2026-06-21 06:39:39 -05:00
research_stack_usage_graph.md docs: add Research Stack searchable usage point graph 2026-06-21 06:39:39 -05:00
research_stack_usage_graph.svg feat(rrc): bare-minimum RRC refactor into SilverSight 2026-06-21 09:08:48 -05:00
research_stack_usage_graph_thumb.png feat(rrc): bare-minimum RRC refactor into SilverSight 2026-06-21 09:08:48 -05:00
RRC_PLACEMENT.md Add SilverSight Core + Library Manifest + RRC placement 2026-06-21 05:59:43 -05:00
RRC_REFACTOR_READINESS.md feat(lean): add SilverSight Semantics core modules (Schema, Layout, WireFormat, View, LayoutBridge, CanalLayout) 2026-06-21 14:00:56 -05:00
SYMBOLIC_REGRESSION_DESIGN.md docs(silversight): symbolic regression design + GP-ELITE citation 2026-06-22 03:03:49 -05:00
TESTING.md feat(rrc): bare-minimum RRC refactor into SilverSight 2026-06-21 09:08:48 -05:00
UNCOMPUTABILITY.md feat(dna): unified theory — DNA encoding, epigenetic computation, logarithmic vector spaces 2026-06-23 02:18:16 +00:00
UNIFIED_THEORY.md feat(dna): unified theory — DNA encoding, epigenetic computation, logarithmic vector spaces 2026-06-23 02:18:16 +00:00