mirror of
https://github.com/allaunthefox/Research-Stack.git
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eafbee22b7
Project-wide sweep to find and fix every place Lean was treated as secondary,
optional, or subordinate to Python/Rust. The invariant: Lean is the source of
truth. Python and Rust are extraction targets only; they contain no logic, no
invariant checks, no decisions.
Changes:
1-Distributed-Systems/ene/src/lib.rs
- CRITICAL: Remove 'Rust is the canonical implementation language for
operational components' — replace with correct extraction-target framing
1-Distributed-Systems/agents/claw/README.md
- Remove 'canonical implementation lives in rust/' and 'source of truth is
ultraworkers/claw-code' blanket claims — scope to CLI binary only;
add Research Stack domain-logic note (Lean is source of truth per AGENTS.md)
- 'canonical Rust workspace' → 'Rust workspace (I/O extraction target)'
1-Distributed-Systems/agents/claw/src/Tool.py
- 'Python-first porting summary' → 'Lean-to-Python extraction summary'
1-Distributed-Systems/agents/claw/src/projectOnboardingState.py
- python_first: bool = True → lean_first: bool = True (Lean always leads)
6-Documentation/docs/specs/ENE_MEMORY_ATLAS_SPEC.md
- CRITICAL: 'Python first (reference) ... Lean-formal next' → correct order:
Lean specification first, Python extraction shim, Verilog hardware extraction
6-Documentation/docs/recovered/geocognition_equation_types_map.mmd
- 'Lean owns logic; Rust owns boundary' → 'Lean owns all logic and decisions;
Rust is boundary shim only'
6-Documentation/docs/semantics/HYPER_DIMENSIONAL_PHYSICS_INTRO.md
- 'Python implementation ... Lean formalization' → 'Lean specification (source
of truth) ... Python extraction shim'
6-Documentation/docs/geometry/GEOMETRY_TAXONOMY_FOR_NLOCAL_ADAPTATION.md
- 'reference specification for the Python implementation' → 'source of truth;
Python is an extraction shim against this spec'
6-Documentation/docs/protocols/TM_MCP_SPECIFICATION.md
- 'Python reference implementation' → 'Python extraction shim' (×2)
5-Applications/scripts/snn/README.md
- 'deterministic Python reference' → 'Python extraction shim / golden-vector
harness'; add TODO(lean-port) note; RTL must match 'Python shim (pending
Lean golden vector)' not 'Python reference'
6-Documentation/docs/METAPROBE_APPROACH.md
- 'DeltaGCLCompression.lean — Lean implementation / scripts/delta_gcl_encoder.py
— Python reference implementation' → Lean is source of truth / Python is
extraction shim
Generated with Devin (https://cli.devin.ai/docs)
Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
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| .. | ||
| ANGRYSPHINX_DONATED_CYCLE_GATE_SPEC.md | ||
| AUTOADAPTIVE_METATYPE_INVARIANTS.md | ||
| AVM_CANONICAL_SPEC.md | ||
| BERNOULLI_OCCUPANCY_RECEIPT_MATH.md | ||
| BurgersHarmonicPeelingVerification.md | ||
| CBF_Hardware_Spec.md | ||
| CONTINUED_FRACTION_COMPRESSION_ADAPTATION.md | ||
| DECODER_FACING_RECONSTRUCTION_CORE.md | ||
| DP_TEXEL_8K_ENCODING_SPEC.md | ||
| DRIFT_QUARANTINE_YANG_MILLS_SPEC.md | ||
| EMBEDDED_NODE_SURFACE_SPEC.md | ||
| ENE_HOTSWAP_PLUGIN_ARCHITECTURE.md | ||
| ENE_MEMORY_ATLAS_SPEC.md | ||
| ENE_METAFOAM_AUTO_COMPRESSION_SPEC.jsonld | ||
| FORWARD_FOUNDATION_EQUATION_COMPILER.md | ||
| GCCL_ENCODING_CONTRACT.md | ||
| GCL_FIELD_EQUATIONS_SPEC.md | ||
| GCL_TOPOLOGY_REVISION_SPEC.md | ||
| GENSIS_COMPILER_SPEC.md | ||
| HDMI_Field_Encoding_Spec.md | ||
| HUMAN_SURFACE_JSONL_SPEC.md | ||
| HYDROGENIC_PHI_TORSION_BRAID.md | ||
| INFORMATION_MANIFOLD_TAXONOMY.md | ||
| K3_COMPLIANT_NODE_STRUCTURE.md | ||
| KernelEquationSheet.tex | ||
| LANGUAGE_SET_MANIFOLD_GRAPH_TYPING.md | ||
| LAW_GATED_RECONSTRUCTION_CORE_SHIFT.md | ||
| LLM_REFINEMENT_PROTOCOL.md | ||
| MarketCognitiveDynamics.tex | ||
| MORPHIC_NEURAL_NETWORK_ROUTING_SPEC.md | ||
| MS3C_NESTED_REDUCTION_GEAR_SPEC.md | ||
| NII_CORE_DRIVER_COMPLETION_SUMMARY.md | ||
| NII_CORE_DRIVER_IMPLEMENTATION_PLAN.md | ||
| OMINDIRECTION_LOGOGRAM_DESIGN_AND_COMPILER.md | ||
| OMNITOKEN_GCL_REDESIGN.md | ||
| Oracle_Interrogation_IDPC_v0_1.md | ||
| PHI_S3C_PIST_BRIDGE_SPEC.md | ||
| PROJECTABLE_GEOMETRY_COMPRESSOR_SPEC.md | ||
| quantization.md | ||
| Quaternion_Sidon_Standing_Field_v0_1.md | ||
| Receipt_Core_Infrastructure_v0_1.md | ||
| RECONSTRUCTION_CORE_MATH_REVIEW_2026_05_09.md | ||
| RESEARCH_STACK_NUVMAP_ADDRESS_SPACE.md | ||
| SEMANTIC_ENGINE_BINDING_DERIVATION_WORKBENCH.md | ||
| SMN_SEMANTIC_MASS_NUMBERS.md | ||
| SSMS_nD_FUNCTIONAL_SPEC.md | ||
| SYMBOLOGY_DERIVED_LOGOGRAM_DESIGN.md | ||
| TINY_IP_CONTIKI_SURFACE_SPEC.md | ||
| Two_Layer_Kinetic_Sidon_Lattice_v0_1.md | ||
| unified_manifold_blit_equation.md | ||
| UNIFIED_SIGNAL_ARCHITECTURE.md | ||
| UNIFIED_TRANSPORT_ENCODING_SPEC.md | ||
| UNIVERSE_MODEL_ORBIT_ZOOM_PROTOCOL.md | ||
| waveprobe_qubo_spec.tex | ||
| WitnessGrammar.md | ||