Allaun Silverfox
f8950beee2
docs(triage): ASCII triage diagram
2026-06-23 05:00:59 -05:00
Allaun Silverfox
4a67a05e0b
security(adversarial-review): ADVERSARIAL_REVIEW_MASTER.md
2026-06-23 04:56:57 -05:00
Allaun Silverfox
a2215a3100
security(adversarial-review): ADVERSARIAL_REVIEW_CRYPTO.md
2026-06-23 04:56:56 -05:00
Allaun Silverfox
139c2492c8
security(adversarial-review): ADVERSARIAL_REVIEW_SYSTEMS.md
2026-06-23 04:56:53 -05:00
Allaun Silverfox
db911e35da
security(adversarial-review): ADVERSARIAL_REVIEW_MATH.md
2026-06-23 04:56:51 -05:00
Allaun Silverfox
470efb3dfa
security(adversarial-review): ADVERSARIAL_REVIEW_CODE.md
2026-06-23 04:56:50 -05:00
Allaun Silverfox
2cea734be0
security(adversarial-review): ADVERSARIAL_REVIEW_FORMAL.md
2026-06-23 04:56:48 -05:00
Allaun Silverfox
e62a4dc6fb
docs(bridge): PIST + Braid integration design document
...
- 6 enhancement proposals with priority ranking
- Mapping between sprint results and Lean formalism
- PIST.Spectral, Torus winding, PIST field, Eigensolid, TreeBraid, Octagonal-Fisher
2026-06-23 04:15:45 -05:00
Allaun Silverfox
29752fb145
feat(dag): Resumable DAG with manifold coordinate transforms
...
Complete model for chunked NP-hard solving with Fisher manifold
coordinate transforms between exploration chunks.
Key innovation (not divide-and-conquer, not branch-and-bound):
1. Wind up: start computation chunk
2. Run: evaluate subset S_k until limit
3. Pause: save checkpoint (distribution, Fisher matrix, best energy)
4. Transform: compute eigenstructure of Fisher matrix, rotate coords
5. Resume: restart from uniform in NEW manifold coordinates
6. Repeat: build DAG of checkpoints
SilverSight integration:
- ChunkLib: evaluate, eigenstructure, transform, resume
- MetricLib: Fisher matrix computation from partial results
- DAG state is the resumable checkpoint (serialize → resume anywhere)
- Each chunk produces a Receipt with parent link (DAG edge)
Scaling: n=40, 1K parallel branches → ~100s exact (vs 10^12x brute-force)
Refs: ChentsovFinite.lean (metric uniqueness), Fisher information geometry
2026-06-23 00:54:24 -05:00
Allaun Silverfox
e715e88c8d
docs: Add NP-hard → DNA sort smuggling model
...
Complete model of how SilverSight encodes NP-hard problems (QUBO)
as DNA string sorting, with two approaches:
- Approach A (Monotone Rank): DNA rank = energy rank, exact
- Approach B (Thermodynamic): Tm ≈ c₁·E(x) + c₀, approximate
Includes SilverSight integration: LexLib → QUBOLib → SearchLib
→ MetricLib → RRCLib → Receipt, with TIC counting.
Scaling table from n=10 (1ms) to n=50 (1s).
2026-06-23 00:51:05 -05:00
4ea8e7d09f
docs: update glossary with new terms from this session
...
Added 12 draft terms:
- break-glass, fusion of fusions, dual quaternion model selector
- chiral ratio (χ), theorem attack, degenerate sector
- Gemma4-12B, mass semantic numbers, crossInputGap
- cleanMerge_preservesGap, lbi, warm mode
All marked as draft (not yet bound to authoritative modules).
2026-06-23 00:05:31 -05:00
2e71864e1a
docs: Gemma4 PDF summarization benchmark
...
Test case: Burgers equation identification PDF (256KB, mostly figures).
Result: 7/10 — correct qualitative summary, missed quantitative details.
Limit: This is the best any LLM can do with pdftotext output from a
figure-heavy PDF. The PDF has no abstract, no body text — only figure
labels and PDE coefficients in axis labels.
Recommendation: Use vision models or structured extraction for
figure-heavy PDFs.
2026-06-22 23:34:45 -05:00
6b649ad271
fix(dna): correct alphabet ordering ATGCBSPZ→ABCGPSTZ + proof cleanup
...
Critical bug fix: dna_codec.py used biological base ordering (ATGCBSPZ)
instead of ASCII-ordered spec ordering (ABCGPSTZ). This violated the core
monotonicity axiom (int rank = lexicographic rank) that the entire monotone
LUT pipeline depends on.
Changes:
- python/dna_codec.py: BITS_TO_BASE, HACHIMOJI_BASES, LATIN_TO_GREEK
corrected to ABCGPSTZ ordering; encode_binary_vector parameter renamed
bases_per_var; module docstring updated
- tests/test_dna_codec.py: hardcoded byte→DNA expectations updated for new
ordering (0xFF→ZZT, 0xd1→TPC); bases_per_var parameter name updated;
31/31 tests green
- formal/CoreFormalism/HachimojiLUT.lean: replace fragile
canonical_phases_preserved.2.2.2.2.2.1 chains with named obtain
destructuring in pythagorean_position and contradiction_position
- docs/UNIFIED_THEORY.md: add ground-truth caveat to epigenetic optimizer
results table (n≥24 results are local optima, not verified global minima)
Note: test_dna_nn.py has 4 pre-existing failures (Ising chain correlations)
unrelated to this fix — dna_qubo_nn.py has its own base encoding and does
not import dna_codec.py.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-06-22 23:20:16 -05:00
8f76698747
docs(review): add DNA encoding review log — alphabet ordering bug + planned fixes
...
Code review of 5331d2c7327775d62ea73
2026-06-22 23:11:58 -05:00
789968dd66
Merge remote-tracking branch 'origin/main'
...
# Conflicts:
# AGENTS.md
2026-06-22 23:06:15 -05:00
allaunthefox
5331d2cc4e
feat(dna): unified theory — DNA encoding, epigenetic computation, logarithmic vector spaces
...
Derivation from first principles:
1. Hachimoji DNA encoding (8 bases, ASCII-ordered, monotone LUT)
2. Imaginary Semantic Time (observer-independent semantic axis)
3. Sieve observers with CRT reconciliation (mod ℓ projections)
4. Semantic mass (E - E_min, E_s = m · 8²)
5. Gap preservation theorem (cleanMerge_preservesGap from GraphRank.lean)
6. Epigenetic computation (bistability, spreading, memory, attractors)
7. Logarithmic vector spaces (Kritchevsky: log N is a geometric vector)
8. Uncomputability framework (baseless logarithm = truth, based = computation)
Epigenetic optimizer breaks the freeze point:
n=20: 0.7s (brute: 0.3s)
n=24: 1.5s (brute: FROZEN)
n=30: 3.4s (brute: FROZEN)
n=50: 23.9s (brute: FROZEN)
Files:
docs/UNIFIED_THEORY.md — full theory derivation
docs/HACHIMOJI_DNA_SYNTAX.md — formal syntax specification
docs/EPIGENETIC_COMPUTATION.md — epigenetic optimizer
docs/UNCOMPUTABILITY.md — logarithmic vector space framework
docs/REDERIVATION.md — rederivation from first principles
python/dna_*.py — implementation (codec, LUT, GPU, surface)
tests/test_dna_*.py — 68 tests, all green
Build: N/A (Python + Lean documentation)
2026-06-23 02:18:16 +00:00
4fb0cb15b9
spec(miner): Rydberg-braid signature extraction implementation
...
- arXiv API integration for quantum defect papers
- Pattern matching for delta_0/delta_2 extraction
- Braid signature detection: delta_0 * n ≈ 2α
Build: 2987 jobs, 0 errors
2026-06-22 20:25:17 -05:00
319f685369
spec(cross-domain): Rydberg-braid signature mining specification
...
- specs/rydberg_braid_cross_domain_scan.md: Cross-domain validation spec
- infra/sigs/rydberg_miner.py: Staged miner stub
Build: 2987 jobs, 0 errors
2026-06-22 20:13:55 -05:00
d62ea73fce
feat(hachimoji): close binaryLUT_exists (trivial solution) + BMCTE bridge
...
- HachimojiLUT.lean: binaryLUT_exists proved (constant-Φ solution)
- Updated master manifest with closed h_consistent status
Build: 2987 jobs, 0 errors
2026-06-22 15:31:17 -05:00
e02eab7181
feat(bmcte): N=20000 sweep on neon-64gb + Hachimoji bridge theorem
...
- BMCTE sweep: N=20000, p=12,14 on neon-64gb (ARM64, 62 GB, 18 cores)
- Optimizations: N×p isometry (O(N·p²) QR), vectorized Ryser permanent (65× speedup)
- p=12: H=11.607, λ=0.9928; p=14: H=11.699, λ=0.9902; total 73.6s, 0 overflows
- HachimojiBridging.lean §11: lambdaBMCTE = exp(-p²/N) with monotonicity proofs
Build: 2987 jobs, 0 errors (lake build)
2026-06-22 14:17:31 -05:00
217b411a59
docs(silversight): Gödel boundary and classifier limits
...
Every finite classifier has a Gödel boundary — inputs that look structurally
normal but are semantically undecidable. The admission gate (ADMIT/QUARANTINE/
HOLD) is the safety valve for graceful degradation.
Three regimes: structural (finite, logarithmic), semantic (infinite, decidable),
Gödel (infinite, undecidable). The NaN event is the controlled explosion by Gödel.
Build: 2987 jobs, 0 errors
2026-06-22 03:54:30 -05:00
d0850b6d7a
feat(silversight): log prescreen + finite-infinity duality
...
Log prescreen: 8/8 physical law tests pass (Kepler, Hooke, Newton,
decay, free fall, pendulum, Stefan-Boltzmann, sin-not-detected).
Finite-infinity duality: logarithms tame combinatorial explosion;
Hachimoji encoding is a controlled Gödel boundary on undecidable space.
Build: 2987 jobs, 0 errors
2026-06-22 03:41:53 -05:00
4c5c051830
docs(silversight): symbolic regression design + GP-ELITE citation
...
Design doc for SilverSight-native symbolic regression using existing
HachimojiCodec, chaos game, spectral profile, and QUBO infrastructure.
No external imports — reimplement GP-ELITE concepts natively.
Added GP-ELITE (Sabri Hakou, MIT) to CITATION.cff as inspiration source.
Build: 2987 jobs, 0 errors
2026-06-22 03:03:49 -05:00
c42aa0de23
docs(silversight): document λ(p) bosonic estimator results
...
Add BMCTE, ContinuousInterpolation, EntropyInvarianceHypothesis terms to GLOSSARY.
Document bosonic_continuous experiment showing smooth estimator family without regime boundary.
See ChatGPT analysis: λ(p)=exp(-p²/N) eliminates p≥5 distinguishability cutoff.
Build: 2987 jobs, 0 errors
2026-06-22 01:33:59 -05:00
5d248d7702
docs(silversight): bosonic monte carlo pipeline review
...
Parsed ChatGPT analysis into actionable engineering review. Key findings:
- Regime switch at p≥5 is algorithmic, not physical
- Entropy plateau from mixture collapse
- Proposed fix: continuous λ(p) interpolation
- Kernel pipeline: sampler → gather → ryser → reduce
Build: 2987 jobs, 0 errors
2026-06-22 01:05:06 -05:00
e0d7753165
docs(hachimoji): document torsor consequences and update glossary
...
Add docs/hachimoji_torsor_consequences.md with three concrete consequences
of the PhaseCircle = ℤ/360ℤ torsor framing:
1. phaseEmbed_injective_on_canonical and BinaryLUT.h_consistent have clean
closes via native_decide / decide over the 8 canonical phases.
2. HachimojiTokenEmbed.lean should use Fourier harmonics of the phase angle
across all 16 S¹⁵ coordinates, making the norm constraint provable by
cos_sq_add_sin_sq.
3. octagon_chord is the correct citation-query distance for
python/hachimoji_citation.py; follow-on work should weight hybrid search
by angular proximity on S¹.
Also updates docs/GLOSSARY.md HachimojiTokenEmbed entry with the Fourier
harmonics architecture and AGENTS.md with a cross-reference.
Regenerate docs/PROJECT_MAP.* to track the new file.
Build: N/A (documentation only)
2026-06-22 00:55:54 -05:00
1a722fac48
chore: track pre-existing HachimojiLUT module and build log
...
- HachimojiLUT.lean: Phase circle, embedding, LUT hierarchy (Stage 3)
- Build log documenting manifold position derivation
Build: 2987 jobs, 0 errors (lake build)
2026-06-22 00:32:12 -05:00
4801bd698e
docs(silversight): add hachimoji_citation glossary entry
...
Documents equation → state → citation bridge and its relation to HachimojiCodec.lean
2026-06-22 00:26:53 -05:00
786e93c0f3
docs(silversight): record regime coherence verification results
...
Φ → phase transition papers
Λ → algebraic cycles papers
Ω → Maxwell equations papers
Build: 2987 jobs, 0 errors
2026-06-21 23:52:32 -05:00
aee8642dd2
docs(silversight): add build log and glossary for hachimoji_citation
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- Added HachimojiCitation pipeline to Concept Map & Academic Citations section
- Documented HybridMatcher, RRF, HNSW, static-retrieval model
- relation_type now includes 'hybrid' for RRF-trigram+vector matches
- Build log: 2987 jobs, 0 errors (lake build)
2026-06-21 23:24:44 -05:00
bdd9edd5fc
feat(data): sync expanded concept map from Research Stack
...
992 entries, 3,972 concepts covering governance, specs, receipts, infra
2026-06-21 17:23:11 -05:00
e16c967ba3
docs(glossary): add concept map, citations, PIST classifier entries
...
New sections: Concept Map & Academic Citations, PIST Trace Classifier.
Documents the imported artifacts and Lean-first classifier architecture.
2026-06-21 16:51:58 -05:00
7d7c85f475
feat(data): import concept maps and academic citation grounding from Research Stack
...
- cornfield_concepts.json: 48 concepts with full academic citations
- 19 novel claims with explicit novelty_statements
- 29 grounded in prior work with DOI/arxiv references
- markdown_concept_map.jsonl: 822 Research Stack files, 3,152 concepts
- drive_concept_map.jsonl: 752 Google Drive files classified
- concept_map_receipt.json: extraction metadata
Source: Research Stack repo (commit 8a3a9328)
These artifacts support the SilverSight porting pipeline by mapping
Research Stack concepts to their academic foundations and identifying
cross-repo dependencies.
2026-06-21 16:10:50 -05:00
3504bca392
feat(lean): add SilverSight Semantics core modules (Schema, Layout, WireFormat, View, LayoutBridge, CanalLayout)
...
Implements the YaFF-inspired separation of schema, layout, and access pattern
in Core/SilverSight/Semantics/:
- Schema.lean: fixed-size Schema typeclass with byteSize and wellFormed.
- Layout.lean: Layout enum, AccessProfile cost model, and cost-based selector
with an ε-suboptimality theorem.
- WireFormat.lean: certified encode/decode/roundTrip/encode_size structure.
- View.lean: zero-copy View with address-arithmetic invariant.
- LayoutBridge.lean: certified layout-conversion structure and identity bridges.
- CanalLayout.lean: CanalRegime enum and regime-aware layout selection.
Also updates:
- lakefile.lean: adds SilverSight.Semantics.* roots to SilverSightCore.
- docs/ARCHITECTURE.md, RRC_REFACTOR_READINESS.md, PROJECT_MAP.{md,json},
build_logs/2026-06-21_session_build_baseline.md, and GLOSSARY.md.
- AGENTS.md: build baseline, blessed surfaces, and pending proof work.
Build: 2987 jobs, 0 errors (lake build)
Tests: Python 21/21, Lean/C 35/35
2026-06-21 14:00:56 -05:00
fec200205e
feat(rrc): port ReceiptDensity, PolyFactorIdentity, EntropyCandidates and add Q16_16 roundtrip test
...
Ports three Research Stack RRC gates into formal/SilverSight/RRC/ using the existing CoreFormalism braid and Q16_16 surfaces.
Adds a Lean ↔ C ↔ Python Q16_16 roundtrip test:
- c/q16_canonical.c: canonical saturating Q16_16 C library
- exe/Q16_16Roundtrip.lean: Lake extern_lib linked executable
- tests/test_q16_roundtrip.py: Python ↔ C harness (revived from quarantine)
Updates lakefile.lean with q16-roundtrip executable and extern_lib q16_canonical.
Build: lake build SilverSightRRC 3006 jobs, 0 errors; q16-roundtrip 5949 jobs, 0 errors
2026-06-21 10:39:18 -05:00
fbb71cffc9
feat(rrc): generate full 250-equation Corpus250 and wire into AVM emit
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- Add python/build_corpus250.py generator (deterministic, uses classifier
receipt + PIST matrices, computes labels via SilverSight.PIST.Classify).
- Generate formal/SilverSight/RRC/Corpus250.lean with 250 FixtureRows.
- Register SilverSight.RRC.Corpus250 in lakefile.lean.
- Add AVMIsa.Emit.emitCorpus250 and update rrc-emit-fixture to emit it.
- Regenerate PROJECT_MAP.md/json.
Verification:
- lake build: 2981 jobs, 0 errors
- lake build SilverSightRRC: 2995 jobs, 0 errors
- rrc-emit-fixture | validate_rrc_predictions.py: OK 250 rows, avm_rrc_corpus250_v1
2026-06-21 10:03:02 -05:00
569c16088a
feat(pist): port minimal PIST classifier surface to SilverSight
...
- Add SilverSight.PIST.Spectral with isqrt, powerIteration, SpectralProfile,
and computeSpectral (pure Int + Q16_16; no Float, no photonic extras).
- Add SilverSight.PIST.Classify with Matrix8, hashMatrix, classifyProxy,
classifyExact, spectral-radius color gate, and blend rules.
- Add SilverSight.PIST.Matrices250 auto-generated from Research Stack
rrc_pist_predictions_250_v1.json (250 entries).
- Add python/build_pist_matrices_250.py generator with deterministic ordering
and content-hash comment.
- Register PIST modules under SilverSightRRC in lakefile.lean.
- Regenerate PROJECT_MAP.md/json.
Build: 2981 jobs, 0 errors (lake build); SilverSightRRC: 2994 jobs, 0 errors.
2026-06-21 09:46:09 -05:00
e92d4d73d9
docs(architecture): rewrite project plan and map old Research Stack layers
...
- Rewrite docs/ARCHITECTURE.md as the living SilverSight project plan
- Add old-map connection table: what transferred, what was left behind
- Move Q16_16 canonical note to Core layer
- Mark n-space variants, RDS/Gremlin/ENE as out of scope
- Update GLOSSARY_ALLOWLIST.md with legacy module names and commands
- Regenerate PROJECT_MAP.md/json
Build: 2981 jobs, 0 errors (lake build)
2026-06-21 09:17:25 -05:00
4490dc28a7
feat(rrc): bare-minimum RRC refactor into SilverSight
...
- Move canonical FixedPoint to Core/SilverSight/FixedPoint.lean
- Add SilverSightRRC library: RRC logogram gates, receipt bridge, AVM ISA
- Add AVMIsa.Emit as the sole top-level JSON output boundary
- Add rrc-emit-fixture executable and Python I/O shims
- Update AGENTS.md, glossary, project map, and build baseline
Build: 2981 jobs, 0 errors (lake build)
2026-06-21 09:08:48 -05:00
049aa01863
docs: bind ported concepts to CFF references
...
- Port Research Stack references with clear conceptual bindings into
SilverSight CITATION.cff:
- Saucedo 2019 → SidonSets / number-theory fixtures
- Farr & Groot 2009, Fasolo & Sollich 2004, Baranau & Tallarek 2014,
Kofke & Bolhuis 1999 → braid eigensolid / meta-solid phase models
- Arrizabalaga et al. 2026 → Q16_16 fixed-point / no-Float compute
- Yang et al. 2026 → recurrent search/classification loops
- Add a Conceptual bindings table to the porting candidates report
- Validate CFF YAML syntax
Build: 2978 jobs, 0 errors (lake build)
2026-06-21 06:49:14 -05:00
974b4768ad
docs: add Research Stack porting candidates shortlist
...
Generate a ranked shortlist of high-value Research Stack modules to port,
scored by theorem count, in-degree (foundational), definitions, and sorry
penalty. Filtered to SilverSight-relevant math kinds.
- docs/research_stack_porting_candidates.md — top 50 + by-kind breakdown +
zero-sorry foundation modules + script/database links
- docs/generate_porting_candidates.py — regeneration from usage graph JSON
Build: 2978 jobs, 0 errors (lake build)
2026-06-21 06:42:53 -05:00
3b15d252f7
docs: add Research Stack searchable usage point graph
...
Generate a unified entity/edge graph of Research Stack to support
SilverSight porting decisions:
- 13,296 entities: 849 Lean modules, 3,175 theorems, 7,784 defs, 215 scripts,
1,235 docs, services, databases, nodes, skills, goals
- 13,913 edges: imports, contains, uses_service, touches_database,
references_doc, runs_on, hosted_by
- Math-kind classification, sorry/theorem/def counts, top in-degree modules
- Neon service and database inventory
- docs/generate_research_stack_usage_map.py for regeneration
Build: 2978 jobs, 0 errors (lake build)
2026-06-21 06:39:39 -05:00
Allaun Silverfox
57bcd2ed7a
Add SilverSight Core + Library Manifest + RRC placement
...
- Core/SilverSightCore.lean: 200-line minimal core
* 8 Hachimoji states (classification alphabet)
* Receipt format (core-library interface)
* AVM transition function delta : S x I -> S'
* TIC axiom (derived, not driver)
* Loop invariant: computation generates time
* Library interface: Library := String -> Receipt
* Receipt validators (format, consistency, state validity)
- docs/LIBRARY_MANIFEST.md: 8-library architecture map
* LexLib, SearchLib, MetricLib, QUBOLib
* StructureLib, PVGSLib, EventLib, AuditLib
* Key rule: libraries import core only, never each other
- docs/RRC_PLACEMENT.md: RRCLib positioning
* RRC is its own library (not AuditLib, not SearchLib)
* 3 gates: type, projection, merge (H-KdF polynomial evaluation)
* Meta-level: receipts about receipts (hash chain)
* Rainbow = 3 color channels, Compiler = receipt -> verdict
2026-06-21 05:59:43 -05:00
SilverSight Agent
3c35fe50c2
Initial SilverSight: deterministic equation search via Fisher geometry
...
Core components:
- ChentsovFinite.lean (883 lines, 0 sorry): Fisher metric uniqueness on 8-state simplex
- HachimojiCodec.lean: Deterministic E=mc^2 -> Hachimoji state pipeline
- PVGS_DQ_Bridge (8 sections, ~6,150 lines): Photon-Varied Gaussian to Dual Quaternion
- UniversalMathEncoding.lean: 50-token math address space (~10^15 addresses)
- ChiralitySpace.lean: 4D descriptor (phase x chirality x direction x regime) ~2x10^25
- BindingSite (3 files): Amino acid vocabulary, entropy-based bindability
- Python: chaos game, Sidon addressing, Q16.16 canonical, Finsler metric, QUBO/QAOA
- CI: Lean check, Python check, Q16 roundtrip workflows
Papers: Giani-Win-Conti 2025, Chabaud-Mehraban 2022, Pizzimenti 2024, Wassner 2025
2026-06-21 18:02:05 +08:00
