Implements the Next Steps of docs/SPECTRAL_CODEBOOK_ANALYSIS.md as python/spectral_codebook.py (stdlib-only; NumPy optional fast path): - Parses the 250 8x8 braid adjacency matrices from PIST/Matrices250.lean. - Primary fingerprint: exact integer characteristic-polynomial coefficients via Faddeev-LeVerrier in Fraction arithmetic (196 unique over 238 distinct matrices, vs 179 unique lambda at 4dp; 6 cospectral non-identical groups; 11 exact-duplicate matrix groups / 23 ids). - Corrects the analysis doc: the 9 'mid band' lambda in (0.5,1) are power-iteration non-convergence artifacts - exact rho = 1.0 for all 9 (peripheral spectra). spectral_radius is now the exact max root modulus (numpy eigvals or Durand-Kerner on the exact char poly); power-iteration lambda kept only for traceability. - Gap-aware quantization: dedupe to 238 distinct matrices, boundaries at gaps > 3x median gap, min-support guard (>=10 distinct per cluster), sparse-tail outlier flagging above lambda ~= 7.66. Result: 9 clusters. - Round trip encode(matrix) -> (codeword, index) -> decode -> equation_id verified bijective over all 250 in tests/test_spectral_codebook.py. - 278-row RRC/Q16_16Manifold corpus: 28 extra rows are repeated ids; boundaries reproduce exactly, no new gaps or clusters. - Emits data/spectral_codebook.json (schema spectral_codebook_v2) with explicit collision classes; docs/SPECTRAL_CODEBOOK_GENERATOR.md notes the hashMatrix base-5 injectivity gap and the ClassifyN threshold (1.5/4.0 Q16.16) vs analysis-doc (0.5/1.0) mismatch. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
7.5 KiB
Spectral Codebook Generator
Date: 2026-07-01
Module: python/spectral_codebook.py
Output: data/spectral_codebook.json
Tests: tests/test_spectral_codebook.py (15 tests)
Implements the "Next Steps" of docs/SPECTRAL_CODEBOOK_ANALYSIS.md: a
gap-aware spectral codebook over the 250 8×8 integer braid adjacency
matrices in formal/SilverSight/PIST/Matrices250.lean, with an
encode/decode round trip and an exact, float-free fingerprint per matrix.
Usage
python3 python/spectral_codebook.py # build + report + write JSON
python3 python/spectral_codebook.py --check-manifold # also run the 278-row corpus
python3 python/spectral_codebook.py --gap-factor 3 --min-support 10 --no-write
python3 tests/test_spectral_codebook.py # or python3 -m pytest tests/test_spectral_codebook.py
Pure stdlib (fractions.Fraction for exactness). NumPy is used only as an
optional fast path for the spectral radius; without it, a Durand–Kerner
root finder runs on the exact integer characteristic polynomial (verified
to agree with NumPy to 4dp in the test suite).
API: build_codebook() returns a Codebook with
encode(matrix) → (codeword, index), decode(codeword, index) → equation_id,
codeword_of(equation_id), cluster_table(), and collision_report().
What changed vs. the original concept
-
Exact char-poly fingerprint replaces float λ as primary key. Each matrix gets the 8 exact integer coefficients of det(λI − M), computed by Faddeev–LeVerrier in exact rational arithmetic (integrality of every coefficient is asserted; Cayley–Hamilton p(M) = 0 is checked in integer arithmetic in the tests). This is strictly finer than 4dp λ — see the measured collision numbers below — and involves no floats at all.
-
Power-iteration λ is demoted to a traceability field. The analysis doc's 9 "mid band / edge-of-chaos" values in (0.5, 1) are power-iteration non-convergence artifacts: all 9 matrices have exact spectral radius ρ = 1.0 (peripheral spectra — several eigenvalues of modulus 1, including complex pairs). The C1 "edge-of-chaos" cluster of the analysis doc therefore does not exist; those matrices belong to the ρ = 1 class.
spectral_radiusin the new JSON is the exact max root modulus of the char poly; the legacy estimate is kept aslambda_power_iteration. Measured: 18 of 250 entries have |λ_pi − ρ| > 1e-3. -
Dedupe before gap analysis. The corpus has only 238 distinct matrices over 250 ids (11 groups of byte-identical duplicates, 23 ids involved). Gap statistics and cluster support are computed over distinct matrices; duplicates are listed per entry (
identical_matrix_ids) and in the collision report. -
Sample-size guard on gap detection. Gaps > 3× median gap propose boundaries (30 candidates), but a segment must hold ≥ 10 distinct matrices to stand as a cluster; smaller segments merge into the neighbor across the smaller gap. Points isolated above a suppressed gap with < 10 occupancy are flagged
sparse_tail: true(outliers, not clusters): the region above λ ≈ 7.66 holds only 10 ids (and only 4 above λ = 11 — {11.68, 16.56, 16.99, 16.99}), far too few to assert cluster structure.
Measured numbers (250 ids / 238 distinct matrices)
Fingerprint uniqueness / collisions
| Fingerprint | Unique values | Ids uniquely identified | Collision groups (ids) |
|---|---|---|---|
| λ (exact, 4dp) | 179 | 164 / 250 | 15 (86 ids) |
| char poly (exact ℤ⁸) | 196 | 183 / 250 | 13 (67 ids) |
| raw matrix bytes | 238 | 227 / 250 | 11 (23 ids) |
- Exact duplicate matrices: 11 groups, 23 ids (12 ids are copies of
another id's matrix). No encoder can separate these;
encodereturns the canonical (first-sorted) entry and the JSON lists the twins. - Cospectral non-identical groups: 6 — same char poly, different
matrices. The largest is the nilpotent class x⁸ (35 ids / 31 distinct
matrices, all ρ = 0); the others are
-1,0,…(5 ids),0,0,-1,0,…(6 ids),-1,-1,0,-1,…(3 ids), and two pairs. - The 4dp-λ count differs from the analysis doc's 190 because the 9 artifact values collapse onto ρ = 1.0 once computed exactly.
- Neither λ nor the char poly is injective — the round-trip decode key
is the within-cluster rank index, and all collision classes are explicit
in
data/spectral_codebook.json(collisions.charpoly_collision_classes,collisions.duplicate_matrix_classes).
Cluster table (gap factor 3.0, min support 10)
Median gap 0.021671 → threshold 0.065013; 30 candidate boundaries, 8 kept:
[0.5, 1.0744, 1.4599, 2.7251, 3.3598, 3.7311, 4.3264, 6.1266];
sparse-tail cutoff λ = 7.6568.
| Codeword | Ids | Distinct | λ range | Note |
|---|---|---|---|---|
| C0 | 35 | 31 | 0.0 | nilpotent class (char poly x⁸) |
| C1 | 20 | 20 | [1.0, 1.000003] | peripheral-unit class (incl. the 9 mis-measured) |
| C2 | 13 | 13 | [1.1487, 1.4253] | |
| C3 | 79 | 77 | [1.4945, 2.6919] | bulk |
| C4 | 29 | 28 | [2.7583, 3.2910] | |
| C5 | 15 | 14 | [3.4287, 3.6970] | |
| C6 | 22 | 20 | [3.7651, 4.2889] | |
| C7 | 19 | 18 | [4.3639, 5.8789] | |
| C8 | 18 | 17 | [6.3743, 16.9915] | 10 sparse-tail outliers above 7.6568 |
The three structurally defensible regions are ρ = 0 (nilpotent), ρ = 1 (peripheral unit), and the ρ > 1 bulk; the finer C2–C8 boundaries are gap-supported but data-driven, and the high tail is outlier territory.
Round trip
decode ∘ encode verified over all 250 equations: bijective on
(codeword, index) pairs; encode(matrix) recovers the exact equation id
for all 227 ids with unique matrices and a byte-identical matrix for the
23 duplicate-group ids.
278-row manifold (formal/SilverSight/RRC/Q16_16Manifold.lean)
278 rows resolve to 250 unique equation ids — the 28 extra rows are repeated ids reusing matrices already in the codebook (238 distinct matrices, no id lacks a matrix). Rerunning gap quantization on the 278-row corpus reproduces the 250-matrix boundaries exactly: no new gaps, no new clusters, all extra rows fall inside existing clusters.
Notes for the Lean side
- Identity layer vs. similarity layer.
ClassifyN.hashMatrixis a positional base-5 hash, but corpus entries reach 9, so injectivity is not provable (positional carries can collide). Using base ≥ max_entry + 1 (e.g. 10) makes injectivity trivial to prove. Recommended split: the positional hash (base ≥ 10) is the identity key; the exact char-poly fingerprint is the similarity/clustering key (invariant under permutation-relabelling of strands, unlike the hash). - Threshold mismatch.
ClassifyN.leandefinessignalThreshold = 98304(1.5 in Q16.16) andoberthHighThreshold = 262144(4.0), butdocs/SPECTRAL_CODEBOOK_ANALYSIS.mdclaims the post-fix thresholds are 0.5/1.0. The code and the analysis doc disagree; this generator matches neither silently — it emits the gap-derived boundaries above and flags the discrepancy here for resolution.
Output schema (data/spectral_codebook.json)
- header:
schema(spectral_codebook_v2),quantization(factor, min support, median gap, kept/candidate/suppressed boundaries, sparse-tail cutoff),clusters(table above),collisions(all counts and explicit collision classes),manifold_278(when--check-manifold). entries[]:equation_id,codeword,index,spectral_radius(exact),lambda_power_iteration(legacy),charpoly(8 exact ints),density,frobenius,trace, optionalsparse_tail, optionalidentical_matrix_ids.